Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 145 7e-30
seq1745 140 3e-28
seq1479 120 3e-22
>seq1893
Length=9943
Score = 145 bits (160), Expect = 7e-30
Identities = 174/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || ||||||||||| |||||||| ||||| ||||||||
Sbjct 803 GCCACCCCGAAGACGCAGGACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGGA 744
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || ||||| |||||||| ||||| ||||| ||||| ||||||| ||
Sbjct 743 CAGAGTACGGCCATCTTCGAGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCGGAGG 684
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811
| || |||||||||| ||| | |||| ||| || | || | |||||| |||||
Sbjct 683 GATGCCCTCCTTGTCC-TGAATCTTTGACTTGACATTGTCG--ATGGTGTCGGATGACTC 627
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| | || || || || || || || ||||| |||||||||||||||
Sbjct 626 GACCTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACGAAAATCTGCATG 575
Score = 134 bits (148), Expect = 1e-26
Identities = 165/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| ||||||| ||| || || ||||| |||||||| ||||||||
Sbjct 1106 GCCACCTCGGAGACGCAACACCAAATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCGGA 1047
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753
|||||||||| | || || || |||||||| ||||| ||||| || || |||||| | ||
Sbjct 1046 GAGGGTGCGCCCATCTTCAAGTTGCTTGCCAGCGAAAATCAGACGTTGCTGGTCCGGAGG 987
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
|| | || ||||| ||| ||| | |||| | ||| | | | ||||||| |||||
Sbjct 986 GATCCCT-TCCTTATCC-TGAATCTTTGACTTGACGTTGTCAATAGTGTCGGAGGACTCA 929
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||||| | || || || || || ||||| ||||| ||||
Sbjct 928 ACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTGACGA 889
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || |||||||| |||||||||||||| ||||| || |||
Sbjct 1333 CCTCCACGCAGGCGAAGAACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAATCGCTC 1274
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || | |||||| || || || || || || || || |||| |||
Sbjct 1273 AGAGTGCGACCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGTTGCTGATCCGGAGGA 1214
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||| | | ||| |||| | | ||| | | | ||| || || || |||||
Sbjct 1213 ATACCTTCCTTAT-CTTGAATTTTAGACTTGACGTTGTCAATAGTATCACTGGATTCCAC 1155
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| || || || || || |||| || || || ||||| ||||||
Sbjct 1154 CTCCAAGGTAATTGTCTTGCCTGTCAAGGTTTTGACAAAAATTTGCATG 1106
>seq1745
Length=53961
Score = 140 bits (154), Expect = 3e-28
Identities = 173/234 (74%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692
|| || ||||| || || | ||||| || || |||||||||||||||||||| ||||||
Sbjct 17001 CCTCCCCCGCGCAGTCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCG 17060
Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752
|||||||| | || |||||||| ||||| || || || || ||||| || |||| |
Sbjct 17061 CTCAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGG 17120
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811
|| | | ||||||||| ||| | || | | || | | | |||||| |||||
Sbjct 17121 GGGATTCCTTCCTTGTCC-TGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTC 17179
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||| | || ||||| || |||||||| || || ||||| |||||||| ||
Sbjct 17180 CACCTCGAGGGTGATCGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCATCTT 17233
>seq1479
Length=130260
Score = 120 bits (132), Expect = 3e-22
Identities = 138/184 (75%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
|||| || || || |||||||| ||||| || | || ||||| |||||||||||||| |
Sbjct 49445 CCTTTTGGATATTGTAGTCGGACAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAA 49504
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||| ||||| ||||| | |||| | |||||||||| |||||| ||| || |
Sbjct 49505 TCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTAGACTTGACATTGT 49564
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | ||||| ||||| ||||| | || || |||||||||||||||||||| ||
Sbjct 49565 CG--ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTTTTACCCGTCAGCGTCTTCAC 49622
Query 41851 GAAA 41854
||||
Sbjct 49623 GAAA 49626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462292245920800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |