Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 109 6e-19 >seq3 Length=1020397 Score = 109 bits (120), Expect = 6e-19 Identities = 307/469 (65%), Gaps = 2/469 (0%) Strand=Plus/Minus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| || || |||||||| || || || ||||| | ||| || |||||||| Sbjct 108634 AACAGCAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 108575 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 || || | || ||||| || || ||||| |||||||| || | ||||| | || Sbjct 108574 AAGGTAAGACCGGGCATCAGACCACGCTTCTTCAACCAGAAGATAGAGGCAAAGGCACCA 108515 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372 ||||| ||||||||||| | || || || || | ||| | || | |||| | Sbjct 108514 CTGAAGAAGATACCCTCAACGGCAGCGAAGGCAATGAGTCGCTGAGCAAAGGTAGACTTC 108455 Query 16373 TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT 16432 || | | ||||||| | |||| || || || | || || || || || Sbjct 108454 TTGTCAGCGATCCATTGGAGAGCCCAGTCAGCCTTACGGCGGATGCAGGGGATGGTGTCA 108395 Query 16433 ATGGCCTTAAACA-ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAA 16491 ||||| || || | || |||| | | || | || || |||||||| || | Sbjct 108394 ATGGCGTTGAAGAGATGGGTCTTCTGGGCGGGC-TCCTTGATGTAGGTATCAATGAGAAG 108336 Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551 | |||| | || ||||| |||||||| || ||||| || || |||||||||||||| Sbjct 108335 AGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGC 108276 Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 ||| | || || ||||| || ||||| || | |||||||| || ||||| ||||| Sbjct 108275 CTCGGGGATCTGAACTTCACCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTC 108216 Query 16612 ACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA 16660 || || || || || | ||||| | |||| | || |||||| Sbjct 108215 GGACGCGGCGAAGAAGGCAAGGATGTGGGAGACGAAAAACTTCTCGTCA 108167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511408652980680