Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=1159409 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966 |||| |||||||||||||| | |||||||| |||| || || | || || | || Sbjct 850141 TGGAGGGTGCTCTCCTTTTGGATGTTGTAATCCGACAGAGTGCGGCCATCCTCAAGCTGC 850200 Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAA 43025 || || || ||||||||||||||||| |||| || | ||| || || || ||| ||| Sbjct 850201 TTACCAGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTC-CTGAATCTT 850259 Query 43026 CTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGT 43085 ||||| || ||| |||||| | |||||| || | || || || || || || Sbjct 850260 GGACTTGACATTGTCAATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGT 850319 Query 43086 TAGAGTTTTCACAAAAATTTGCATTTT 43112 ||||| || || || || ||||| || Sbjct 850320 GAGAGTCTTGACGAAGATCTGCATCTT 850346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381365421500142