Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 210 3e-49 seq21 111 2e-19 >seq3 Length=1020397 Score = 210 bits (232), Expect = 3e-49 Identities = 590/882 (67%), Gaps = 39/882 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||| |||| ||||| ||||| | ||| ||| | ||||| Sbjct 108069 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACTGCCGAGGAGATTGATCTC 108128 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGA-GTTTATA-- 125135 |||||||| || | || ||| | || |||| || ||| ||||| |||| | Sbjct 108129 TCCAAGGATCTTCATGACTGGAGTAACCGATTGAACGA---TGA-CGAGAAGTTTTTCGT 108184 Query 125136 -TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGA 125193 || ||||| | |||||||| |||| ||||| || ||||||||||| || | ||| || Sbjct 108185 CTCCCACATCCTTGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACCTTGTCGA 108244 Query 125194 CACGATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAAT 125251 |||||| | |||| | || || |||| ||| ||||| ||||| ||||| || Sbjct 108245 -GCGATTCAGCGGTGAAGTTCA-GATCCCCGAGG-CTCGATGCTTCTACGGCTTCCAGAT 108301 Query 125252 CATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA 125311 |||||| |||||| | ||||| || | ||||||| || ||||| | ||||| || Sbjct 108302 CATGATGGAGAACATCCACTCCGAGACGTACTCTCTTCTCATTGATACCTACATCAAGGA 108361 Query 125312 -TCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAA 125370 |||| | | || ||| ||||| ||||| || ||||| | || | || || | Sbjct 108362 GCCCGCCCAGAAGACCCAT-CTCTTCAACGCCATTGACACCATCCCCTGCATCCGCCGTA 108420 Query 125371 AGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGG 125430 ||||| | |||| | | ||||||| |||| | |||||| | | || | |||| Sbjct 108421 AGGCTGACTGGGCTCTCCAATGGATCGCTGACAAGAAGTCTACCTTTGCTCAGCGACTCA 108480 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490 | || ||||| ||||| ||||| |||||||| ||| ||||| | ||||| ||| Sbjct 108481 TTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCTTTGCCTCTATCTTCTGGT 108540 Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550 | |||||||| || || |||||||| || || | |||||| | || ||||| |||| Sbjct 108541 TGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACG 108600 Query 125551 AGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAGTG 125608 |||| || ||| |||||| ||| || ||||| || || || | | ||| || | Sbjct 108601 AGGGTCTCCACACTGACTTCGCCTGCCTGCTGTTCTCTCACCTGAAGAACCGCCC-AG-G 108658 Query 125609 CAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668 || | | ||| ||| ||||| ||||||||||| || || | || Sbjct 108659 CAAGGACCTCATTGAGAAGATCATC---------ACCGATGCCGTTGTCATTGAGAAGGA 108709 Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728 ||| | || || | | || | | | | |||||||||| ||| | ||| | Sbjct 108710 GTTCTTGACTGAGGCTTTGCCCTGCGCCCTTCTCGGCATGAACTCCAACTTGATGAAGCA 108769 Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTA 125785 |||||| ||||| || || || ||||| || || ||||| || ||| | || Sbjct 108770 GTACATCGAGTTCGTCGCTGACCGTCTGTTGGTCG---CCCTTGGCAACGAGAAGGTCTA 108826 Query 125786 CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTT 125845 | ||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 108827 CCGTTCCAGCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTT 108886 Query 125846 TTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 ||||||||| ||| | || ||| ||| || ||||||| Sbjct 108887 CTTCGAGAAGCGAGTCGGTGACTACCAAAAGGC--CGGTGTC 108926 >seq21 Length=436828 Score = 111 bits (122), Expect = 2e-19 Identities = 304/458 (66%), Gaps = 6/458 (1%) Strand=Plus/Plus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 |||||||| ||||| ||||| || | || || || | ||| ||||| | || |||| Sbjct 6196 GATACGTTGACCAGGGTGGCAACAAGAGACCTGGTGCCTTCGCCATCTACCTTGAGCCTT 6255 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||| |||| || || || || |||| | ||||| ||| ||| || || | | Sbjct 6256 GGCACTCGGATGTCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 6315 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| | || | || | || |||||| | || || | ||||||||||| ||| | Sbjct 6316 GTGCCCGTGATCTTTTCTTGGCTCTCTGGATTCCCGACCTTTTCATGAAGCGTGTCGAGA 6375 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | ||| | |||| | ||||||||| || || || || || | ||| || | Sbjct 6376 AGAACGGCGAGTGGACTTTGATGTGCCCCAACGAGTGCCCTGGCCTAGCTGATGTCTACG 6435 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163 |||| ||||||||||| |||| || ||| || || || || ||| || Sbjct 6436 GCGACGAGTTTGAGGCTTTGTACGAAAAGTATGAGGCTGAAGGTCGCGGCCGCCAGAAGA 6495 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTC 97221 || | || | |||| |||||| | |||| || ||| ||| ||| || || |||| | Sbjct 6496 -TCAAGGCGC-AGAAGCTGTGGTATGCCATTCTTGA-GGCCCAGACCGAAACCGGAAACC 6552 Query 97222 CGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281 | | ||| || ||||||||| | || || || ||||||||| || | || || | Sbjct 6553 CCTTCATGCTTTACAAGGATCACTGCAACCGTAAGAGCAACCAAAAGAACCTTGGTACTA 6612 Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 | ||||||| |||||||| || ||| | |||||| Sbjct 6613 TTCGCAGCTCCAACCTGTGCACTGAGATTATCGAGTAC 6650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741050872347240