Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq8 114 1e-20 >seq8 Length=601961 Score = 114 bits (126), Expect = 1e-20 Identities = 132/176 (75%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| | ||||| || | ||||||||| ||| || ||||| ||| || || Sbjct 432430 GCGCTCGATCACGAGCTGTGCCACGCGGTCGCCCTCCTTGACGTCGAAGTCGACGT--CC 432487 Query 5641 GAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCG 5698 || ||||||||||| ||| ||| ||| |||||||||||||| || ||||| ||| Sbjct 432488 GAGTGGTTGAACAGCAGCACCTTGACGGGGCCCCGGTAGTCGGCGTCGATGACGCCGGCG 432547 Query 5699 CCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754 ||| ||||||||||| ||| ||| || ||||| || || |||||||| ||||| Sbjct 432548 CCCGTGTCGATGAAGTTCTTCGACGCGAGCCCGGACCGCGGGGCCACGCGCCCGTA 432603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430049688082088