Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq39 86.0 6e-12 >seq1 Length=1159409 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 |||||||| | ||| ||||| || |||| | |||||| ||||| || || | || Sbjct 850153 TCCTTTTGGATGTTGTAATCCGACAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAA 850212 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || |||| || || || ||||| ||||| || ||||| | ||| || | |||||| | Sbjct 850213 ATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACATTG 850272 Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 | | |||||| | | ||||| |||| |||||||| || ||||| ||||| || || Sbjct 850273 TCAATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACG 850332 Query 94997 AAGATCTGCAT 95007 ||||||||||| Sbjct 850333 AAGATCTGCAT 850343 >seq39 Length=338136 Score = 86.0 bits (94), Expect = 6e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || ||| | ||||| |||| ||||| || || || || || || || Sbjct 214936 ATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGGGGGATGCCCTCCTT 214995 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || | |||||| | ||| |||||| | || || |||| ||||| Sbjct 214996 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGAT 215055 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 || || || || || || || || |||||||||||| || Sbjct 215056 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATT 215095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448286162327640