Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11]
899 sequences; 37,704,138 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq58 104 4e-18
seq12 104 4e-18
>seq58
Length=209939
Score = 104 bits (114), Expect = 4e-18
Identities = 126/172 (73%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587
|||| | || |||| ||||||| || | ||| |||||| ||||||| || || ||
Sbjct 1999 CTCTACAGTGATCTACGAAGAGACGCGAGGTGTCTTGAAGTCCTTCCTCGAGGGTGTCAT 1940
Query 16588 CCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATAT 16647
|| |||||| || ||| ||||||||||| || || ||||| ||||| || | || |
Sbjct 1939 CCGTGATGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACGTCGCTTGACGT 1880
Query 16648 CGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| || ||||| || |||||||| | | || ||||| || |||||
Sbjct 1879 CGTCTACGCCTTGAAGCGACAAGGCCGCACCCTCTACGGTTTCGGTGGTTAA 1828
Score = 102 bits (112), Expect = 1e-17
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || ||||| || || ||||| ||||| ||||
Sbjct 2155 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACTAAGCCCGCTA 2097
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
|||| ||||| || ||||||||||| ||||||||| ||||
Sbjct 2096 TCCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTC 2057
>seq12
Length=566664
Score = 104 bits (114), Expect = 4e-18
Identities = 84/99 (85%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 400033 GCCAAGCGCCACCGTAAGAT-TCTTCGTGACAACATCCAGGGCATCACCAAGCCCGCTAT 399975
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||| ||||| |||||||||||||| ||||||||| ||||
Sbjct 399974 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 399936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074378038007
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |