Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq21 315 2e-80 seq28 100 7e-16 >seq21 Length=436828 Score = 315 bits (348), Expect = 2e-80 Identities = 1129/1740 (65%), Gaps = 44/1740 (3%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || | |||||||| ||| | ||||||||||| | |||||| | ||| Sbjct 5832 ATTGTAGAGAGACCGCAGCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGTGACGAT 5891 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCA 363559 ||||| | ||| |||| || || ||| | || | | ||| ||||| || || Sbjct 5892 GTTGAGAAGGTTATTCAAACCTACAA-CTTG-ATGTCGAACAAGTACTTCACCCATGCTT 5949 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 | || || | | || || ||||| | | ||||| ||||||| ||||| || | Sbjct 5950 CCCCCACTCTCTTTAACGCCGGAACGCCACAAGCACAGTTGTCTTCCTGCTTCCTCGTCG 6009 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || ||| || ||||||| || || || |||| ||||| | || | Sbjct 6010 ATATGAAGGATGACAGCATTGACGGTATCTACGATACCCTCAAGACCTGTGCCATGATCT 6069 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC 363738 |||||| || || || |||||| | |||||| | | ||||| || | | ||| Sbjct 6070 CCAAGATGGCTGGTGGTATTGGTCTCAACATCCACCGTATCCGTGCTACCGG-CTCTTAT 6128 Query 363739 ATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797 || ||| || || || |||||| || | || |||||||||||||| || | || Sbjct 6129 AT-CGCTGGAACCAACGGTACCTCGAACGGAATTGTACCCATGCTTCGTGTCTTCAATAA 6187 Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857 ||||| || ||||| ||||||||||| ||| | || || || || || || || Sbjct 6188 CACTGCTAGATACGTTGACCAGGGTGGCAACAAGAGACCTGGTGCCTTCGCCATCTACCT 6247 Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGA 363917 |||||| || | ||| | || ||||| || || || || || ||| || || || Sbjct 6248 TGAGCCTTGGCACTCGGATGTCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGA 6307 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977 |||| | ||||| |||||||| |||| || || ||| || | |||| ||| |||||||| Sbjct 6308 GGAAGTCCGTGCCCGTGATCTTTTCTTGGCTCTCTGGATTCCCGACCTTTTCATGAAGCG 6367 Query 363978 CGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035 || ||| | | | | | ||| | | | ||||| |||| || || || || | Sbjct 6368 TGTCGAG--AAGAACGGCGAGTGGACTTTGATGTGCCCCAACGAGTGCCCTGGCCTAGCT 6425 Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095 ||||| | || ||||| | || ||| | |||||||||||||| | || || | Sbjct 6426 GATGTCTACGGCGACGAGTTTGAGGCTTTGTACGAAAAGTATGAGGCTGAAGGTCGCGGC 6485 Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155 || ||| || || |||||||| |||| |||||| | || | |||| || || Sbjct 6486 CGCCAGAAGATCAAGGCGCAGAAGCTGTGGTATGCCATTCTTGAGGCCCAGACCGAAACC 6545 Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215 |||| |||| ||| | ||||| ||| |||||||| ||| |||||| || ||||| Sbjct 6546 GGAAACCCCTTCATGCTTTACAAGGATCACTGCAACCGTAAGAGCAACCAAAAGAACCTT 6605 Query 364216 GGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGA 364274 ||||| |||| |||| |||||| || || |||||||| || ||| | || || || || Sbjct 6606 GGTACTATTC-GCAGCTCCAACCTGTGCACTGAGATTATCGAGTACTCGGCGCCTGATGA 6664 Query 364275 GACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGG 364328 | || || || ||| | || || |||| || ||| | || || || || || Sbjct 6665 GGTCGCTGTCTGCAACTTGGCTTCTCTCGCTCTGCCGTCTTTCGTTGATTATAACGAGGG 6724 Query 364329 TACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT-ACTT--GCAATCTCGA 364385 | | ||| |||| | | | || || | || || | | | | | || || | Sbjct 6725 CAACTACGACTTCCAGAAGTTGCACGATGT--CGTA-CAGGTTGTCGTCCGTAACCTGAA 6781 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATG 364440 || | ||||| || || || || | || || || || ||| || ||| Sbjct 6782 CAGAATCATCGATGTCAACTACTACCCTGTCCCGGAGGCTCGCAACAGC-----AACATG 6836 Query 364441 CGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATG---ATGCTC 364497 || || || || |||||||||||||| ||||| || |||||| ||| || ||| | Sbjct 6837 CGACACCGTCCCATTGGTCTTGGTGTTCAGGGTCTTGCTGACACTTTCTTGGCATTGCGC 6896 Query 364498 AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATG 364557 ||| | || || |||||||| || | || || ||| | || || || || || Sbjct 6897 ---ATGCCTTTCGAGTCGCCTGAGGCCAGACAGCTGAACAAGCAAATTTTCGAGACCATC 6953 Query 364558 TATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACT 364617 || || || ||||||| || || | || || |||| | ||||| || Sbjct 6954 TACCATGGTGCCTTGACTGCCTCCATGGAGATTGCCAAGGTTGAGGGTACCTACTCCACC 7013 Query 364618 TATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCA 364677 || ||||| |||||| | || || || | | |||| || | |||||||||||||| Sbjct 7014 TACGAGGGCTCCCCTGTCTCCCAAGGTATTCTTCAGTACGACATGTGGAATGTCACGCCG 7073 Query 364678 TCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAA 364736 || | | ||| | ||| | || | | | | | ||| || ||||| ||||| Sbjct 7074 TCCGATCTTTGGGATTGGACCAGCCTCAAGGAAC-AGATCAAGCAGAATGGTGTACGCAA 7132 Query 364737 CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGA 364796 | || | || || |||||||| || || | ||||| || || |||||||| Sbjct 7133 CAGTCTGTTGGTCGCTCCTATGCCCACTGCCAGCACATCCCAGATTCTGGGTAACAACGA 7192 Query 364797 GTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCC 364856 ||| ||||| || | || || | || || || || || ||| | || || || | Sbjct 7193 GTGTTTCGAGCCTTACACTTCGAACATCTACTCTCGTCGTGTGCTTGCTGGTGAGTTCCA 7252 Query 364857 GGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCAT 364916 ||| ||||| | || | ||||| ||| ||| || || ||| || |||| Sbjct 7253 GGTCGTTAACCCTTGGCTTCTTAAGGACCTTGTCGATATGGGTCTCTGGTCCGATGGCAT 7312 Query 364917 GAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGA 364976 ||||||| |||||| |||| |||||||| ||||||||||| |||| || Sbjct 7313 GAAGAACCGTATCATTGCCGAAGGCGGTTCTGTTCAGAACATTCCTAACATTCCTACCGA 7372 Query 364977 TCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGC 365036 | ||| | | ||||| || || |||||||| ||| | ||| | || | ||||| Sbjct 7373 CATCAAGGCGCTCTACAAGACGGTTTGGGAAATCTCCCAGAAAACAGTTGTTCAGATGGC 7432 Query 365037 GGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCC 365096 || || || ||||| || || ||| |||||| | ||| | ||||| |||| Sbjct 7433 TGCTGACCGTGGTGCGTTCATTGATCAATCCCAGTCACTGAACATTCACATGAGAGAGCC 7492 Query 365097 AACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||| | |||| | || |||||| ||| || ||||| |||||| ||||| || Sbjct 7493 CACCATGGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGCTCGGTCTCAAGACCGG 7552 >seq28 Length=396709 Score = 100 bits (110), Expect = 7e-16 Identities = 100/127 (79%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 65871 GTTACGAATCGTTCCGTCATAAT-TGCACATATTATCTTCACTTGCCTTTACAAGACAAC 65929 ||| |||| |||||||||||| ||| |||| ||||||| ||| || || |||| || Sbjct 198632 GTTTCGAACCGTTCCGTCATATCGTGCGCATAC-ATCTTCAAGTGCTTTGACGAGACGAC 198574 Query 65930 GCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGG 65989 |||||||||||||| | | ||||| || ||||||||||||| ||||| ||||| || | Sbjct 198573 GCTGGATGTAACCAGTTTCGGCAGTCTTGACCGCGGTATCAATCAGACCCTCACGACCAG 198514 Query 65990 ACATTGC 65996 ||| || Sbjct 198513 CCATGGC 198507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303338587403018