Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq21 116 3e-21 seq39 113 4e-20 >seq1 Length=1159409 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | ||| ||||||||| ||||||||||| Sbjct 850116 GCCACCACGGAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTTTGGATGTTGTAATCCGA 850175 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| |||||||| || ||| | || || ||||| ||||| ||||| Sbjct 850176 CAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAATCGCTGTTGGTCGGGAGG 850235 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||||| | || | ||| |||| |||||||| Sbjct 850236 GATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCGGAGGACTCGAC 850295 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || ||||| || ||||| |||||||| Sbjct 850296 CTCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 850343 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || ||||| ||||||||||| ||| Sbjct 849828 CCACCACGGAGACGAAGGACAAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAT 849887 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| || |||||||| ||| |||| | |||||| ||||| || || Sbjct 849888 AGGGTTCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 849947 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | || ||||| | || | || |||| ||||||| Sbjct 849948 ATGCCTTCCTTGTC-CTGAATCTTTGACTTGACATTGTCGATTGTGTCGGACGACTCGAC 850006 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| ||||| ||| || ||||| || || || |||| Sbjct 850007 CTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGA 850044 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| |||||||| ||||||||||| ||||| Sbjct 849600 CCACCACGAAGTCGAAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGCTG 849659 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || || |||| | ||||| ||||| || ||| Sbjct 849660 AGAGTTCGGCCGTCCTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCAGGCGGG 849719 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | ||||| | Sbjct 849720 ATACCCTCCTTGTCTTGGATCTTCGACTTAACGTTGTCGATGGTGTCCGACGACTCCACC 849779 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || |||||||| || || || ||||| || ||||| Sbjct 849780 TCGAGGGTGATCGTCTTACCGGTGAGGGTCTTGACGAAGATTTGCAT 849826 >seq21 Length=436828 Score = 116 bits (128), Expect = 3e-21 Identities = 703/1110 (63%), Gaps = 29/1110 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || |||||||| ||||| || || | ||||||||| | || | ||| || ||| | || Sbjct 7261 TTAACGACCTGGAACTCACCAGCAAGCACACGACGAGAGTAGATGTTCGAAGTGTAAGGC 7202 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| ||||||| || ||||| || || | || | || |||||||| || ||| Sbjct 7201 TCGAAACACTCGTTGTTACCCAGAATCTGGGATGTGCTGGCAGTGGGCATAGGAGCGACC 7142 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || | ||||| | || | || |||||| | |||||| || | ||||||||| Sbjct 7141 AACAGACTGTTGCGTACACCATTCTGCTTGATCTGTTCCTTGAGGCTGGTCCAATCCCAA 7082 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | |||| | || | ||||||||||||||| | ||| || | | | | ||| | Sbjct 7081 AGATCGGACGGCGTGACATTCCACATGTCGTACTGAAGAATACCTTGGGAGACAGGGGAG 7022 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCC--TCCAGAG 145355 || | ||| ||| | ||| | ||||| | ||| || | | || || | Sbjct 7021 CCCTCGTAGGTGGAGTAGGTACCCTCAACCTTGGCAATCTC-CATGGAGGCAGTCAAG-G 6964 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | || || || |||||| ||||||| |||| ||| | | || ||| |||| Sbjct 6963 CACCATGGTAGATGGTCTCGAAAATTTGCTTGTTCAGCTGTCTGGCCTCAGGCGACTCGA 6904 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||||||||| | |||| || || || ||||| | || | || ||||| | Sbjct 6903 AAGGCATGCGCAATGCCAAGAAAGTGTCAGCAAGACCCTGAACACCAAGACCAATGGGAC 6844 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAATT 145534 | ||| ||||||||| | | ||| | || ||| || | | | || ||||| ||| Sbjct 6843 GGTGTCGCATGTTGCTGTTGCGAGCCTCCGGGACAGGGTAGTAGTTGAC-ATCGATGATT 6785 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 | |||| ||| || || || |||| | | | ||||||| | ||||| | Sbjct 6784 CTGTTCAGGTTACGGACGACAACCTGTACGACATCGTGCAACTTCTGGAAGTCGTAGTTG 6725 Query 145595 GCCTCG------TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACT 145648 ||||| ||||||| | || || | |||| || ||||| || || || Sbjct 6724 CCCTCGTTATAATCAACGA-AAGACGGC-----AGAGCGAGAGAAGCCAAGTTGCAGACA 6671 Query 145649 GCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGAT 145707 || ||| || |||| || ||| | | ||||| | ||||| ||| | || Sbjct 6670 GCGACCTCATCAGGCGCCG-AGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAAT 6612 Query 145708 GGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767 || || || || | || || || || | |||||| |||||||| |||||| | || Sbjct 6611 AGTACCAAGGTTCTTTTGGTTGCTCTTACGGTTGCAGTGATCCTTGTAAAGCATGAAGGG 6552 Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTG 145827 || || || ||| | ||| | || | || | |||||| | || Sbjct 6551 GTTTCCGGTTTCGGTCTGGGCCTCAAGAATGGCATACCACAGCTTCTGCGCCTTGATCTT 6492 Query 145828 CTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887 ||| || ||| || || | || || || ||| | |||||||| || ||||| Sbjct 6491 CTGGCGGCCGCGACCTTCAGCCTCATACTTTTCGTACAAAGCCTCAAACTCGTCGCCGTA 6432 Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947 | ||| | ||||| || |||| |||||| ||||||| | ||| ||||||| | Sbjct 6431 GACATCAGCTAGGCCAGGGCACTCGTTGGGGCACATCAAAGTCCACTCGCCGTTCTTCTC 6372 Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCA 146007 ||| |||| ||| || | || || | ||| || || | | | || || || | Sbjct 6371 GACACGCTTCATGAAAAGGTCGGGAATCCAGAGAGCCAAGAAAAGATCACGGGCACGGAC 6312 Query 146008 ATCCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGATGTCCGCGTGCCAC 146065 ||||| || || ||| || | | | || | | ||| |||| |||||| Sbjct 6311 TTCCTC-CTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCGA-AGACATCCGAGTGCCAA 6254 Query 146066 GGTTCAATATAGACGGCGAGGGCTCC--TTTTCGT-TTGCCACCCTGGTCCACGTGACGT 146122 || |||| |||| ||||| ||| || | || | |||||||||||||| |||| | | Sbjct 6253 GGCTCAAGGTAGATGGCGAAGGCACCAGGTCTCTTGTTGCCACCCTGGTCAACGT-ATCT 6195 Query 146123 ACCA-TGTTGTTAAAGACGCGCACCATGGG 146151 | || |||| || ||||| || | |||||| Sbjct 6194 AGCAGTGTTATTGAAGACACGAAGCATGGG 6165 >seq39 Length=338136 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||| || || | || | ||| |||||| || |||||||| ||| Sbjct 214864 GCCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 214923 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 214924 GAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGGGG 214983 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||||| | || | ||| |||| ||||| | Sbjct 214984 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCCAC 215043 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 215044 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 215093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007495756160