Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq83 84.2 2e-11 seq1 84.2 2e-11 >seq83 Length=135873 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || || || |||||||| || ||| ||| |||| || | ||| Sbjct 25691 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTTCGGCCGTCCTCGAGTTGC 25632 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | |||| |||||||||||| |||||||| |||||||| ||| ||| Sbjct 25631 TTGCCGGCGAAGATCAGACGCTGTTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTG 25572 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| | || || || | ||| ||||| || || ||| Sbjct 25571 GACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTC 25512 Query 15154 AGAGTTTTTACAAA 15167 || || || || || Sbjct 25511 AGGGTCTTCACGAA 25498 >seq1 Length=1159409 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || ||||| || || || |||||||| ||| || ||| |||| || | ||| Sbjct 849852 TGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCGTCCTCAAGTTGC 849911 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | |||| ||||||||||||| ||||| ||||||||||| ||| || Sbjct 849912 TTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGAATCTTT 849971 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| || || || | ||||||||| || || || Sbjct 849972 GACTTGACATTGTCGATTGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTTCCGGTG 850031 Query 15154 AGAGTTTTTAC 15164 || || || || Sbjct 850032 AGGGTCTTGAC 850042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357388084212215