Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 seq39 84.2 2e-11 >seq1 Length=1159409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || |||||||| || || || || ||| Sbjct 849825 ATACCACCACGGAGACGAAGGACAAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCG 849884 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| || || | ||| || || ||| | |||| || || ||||| || Sbjct 849885 GATAGGGTTCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGG 849944 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| || || ||||| ||| |||| || | |||||||| |||||| Sbjct 849945 GGAATGCCTTCCTTGTCCTGAATCTTTGACTTGACATTGTCGATTGTGTCGGACGACTCG 850004 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || ||||| |||| || || ||||| || || || || Sbjct 850005 ACCTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGAC 850042 >seq39 Length=338136 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||| || |||| ||| || | || || || ||| | Sbjct 214901 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 214960 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||||||| |||||||| || || ||||| || || || ||||| || |||| Sbjct 214961 ATCAATCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 215020 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | |||||||||||||| || || || || | || ||||| || || || || || Sbjct 215021 TCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACG 215080 Query 45330 AAAATTTGCAT 45340 || || ||||| Sbjct 215081 AAGATCTGCAT 215091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451998120614040