Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq21 98.7 2e-15 >seq21 Length=436828 Score = 98.7 bits (108), Expect = 2e-15 Identities = 325/496 (66%), Gaps = 11/496 (2%) Strand=Plus/Minus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTAC 203893 ||||| || || ||||||||||| | | |||||| || || | | || |||||| Sbjct 7612 TCTTGGTCGACAGTGAACTGAATAGGGG---CGGCAGCAGCTTGGGTACGTAGGTAGTAC 7556 Query 203894 ATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACG 203953 ||||||||||| || || || ||| || | ||||||| | | |||| || | Sbjct 7555 ATGCCGGTCTTGAGACCGAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATG 7496 Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCT 204013 |||| || ||||||||||||||| |||||| ||| || ||||| | | || || Sbjct 7495 GTGGGCTCTCTCATGTGAATGTTCAGTGACTGGGATTGATCAATGAACGCACCACGGTCA 7436 Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCT 204072 || ||||| | | || || ||||| || || ||||| ||||||||| | | || || | Sbjct 7435 GCAGCCATCTGAACAACTGTTTTCTGGGAGATTTCCCAAACCGTCTTGTAGAGCGCCT-T 7377 Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTGATC-GAGCCGTTGTCGGCCATCAGTCTCA 204131 | ||| ||| | | | | || |||| | || ||| ||||| || | | Sbjct 7376 GATGTCGGTAGGAATGT-TAGGAATGTTCTGAACAGAACCGCCTTCGGCAATGATACGGT 7318 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191 || || | | || ||| | |||| || || ||| | || ||||| | Sbjct 7317 TCTTCATGCCATCGGACCAGAGACCCATATCGACAAGGTCCTTAAGAAGCCAAGGGTTAA 7258 Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 || ||| || || || | ||||| | || | | | | ||| ||| | || |||| Sbjct 7257 CGACCTGGAACTCACCAGCAAGCACACGACGAGAGTAGATGTTCGAAGTGTAAGGCTCGA 7198 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 | ||||||||| || | |||||| | |||||||| |||||||| ||||| | | || Sbjct 7197 AACACTCGTTGTTACCCAGAATCTGGGATGTGCTGGCAGTGGGCATAGGAGCGACCAACA 7138 Query 204312 GGGAGTTGCGCACACC 204327 | |||||| ||||| Sbjct 7137 GACTGTTGCGTACACC 7122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795146264443440