Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq36 401 8e-107 seq28 192 7e-44 >seq36 Length=342254 Score = 401 bits (444), Expect = 8e-107 Identities = 1049/1593 (66%), Gaps = 29/1593 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || || || | ||| || || || || || || Sbjct 302047 TCATCCTCCTCCTTGTACTTCTCAGCCTCGGAAAGCATGCGCTCGATCTCCTCCTTGGAC 301988 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 || | ||||| ||||| || || || ||||| | ||| || || | | |||| || || Sbjct 301987 AAGCGGCCCTTGTCATTGGTGATGGTGATCTTGTTGGACTTTCCAGTGCCCTTCTCAACA 301928 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| || |||| ||||| || ||||||| ||||| | || | |||||| || | Sbjct 301927 GCAGAGACGTTCATGATACCGTTGGCATCAAGGTCGAAGGTGACCTCAATTTGAGGGACA 301868 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | ||||||| || || || || | || ||| | || || | |||| ||| | Sbjct 301867 CCACGGGGTGCGGGCGGGATGCCGGTAAGCTCGAATTTGCCGAGCAGGTTGTTGTCCTTG 301808 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || ||||||| || || |||| || || || Sbjct 301807 GTGCGTTGACGCTCACCCTCGTAGACTTGGATAAGGACACCAGGCTGGTTGTCGGAGAAG 301748 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | ||||| | | |||| Sbjct 301747 GTAGAGAAGACCTCGGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGAATGAGCTTGGTC 301688 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| ||| |||| || ||||| || | | ||||| ||| | |||| Sbjct 301687 ATCATACCACCAGCAGTCTCGATACCGAGAGAGAGGGCGGCAACGTC---GAGAAGCAGG 301631 Query 6989 -TCT------TGAACA--GATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTC 7039 ||| || || ||| | | ||||| | | ||| ||||| ||||| | Sbjct 301630 ATCTCGTTGGTGGACTTGGATGAGGTG---TCACCAGAAAGGATAGCGGCCTGGACGGCG 301574 Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || ||||| |||||||| || | || || | || || ||||| || Sbjct 301573 GCACCGTAGGCAACAGCCTCGTCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAG 301514 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 || || | | | | |||| ||||| || || || |||||||| | ||||| Sbjct 301513 TAGTCGGTGATGAGCTTCTGAACACGGGGGATACGGGTGGAGCCACCGACGAGGACGATC 301454 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT- 7218 || | || | || || |||||||| | || || ||||| || | || Sbjct 301453 TCGTGGACCTGGGACTTGTCGATCTTGGCATCGGCGAGGACACGGTCGACGGGCTGGATG 301394 Query 7219 --ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276 | || ||||| | ||| || || ||||| || || |||||||| ||||| || Sbjct 301393 GTAGAT---CGGAAGAGATCCTGGCAGAGCTCCTCGAATCGAGCACGGGTGATGGAGGTG 301337 Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336 ||||| |||| || ||| | | || || || || || | || || || | |||||| Sbjct 301336 TAGAAGTCAATACCCTCGAACAGGGAGTCGATCTCGATCGAAGTCTGGGCAGACGAAGAC 301277 Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396 | |||||||| || ||||| || || || || | ||| || || ||||| | ||| | Sbjct 301276 AGAGTTCGCTTGGCACGCTCGCAAGCAGTGCGAAGACGTCGGAGAGCACGAGCGTTGGTG 301217 Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 || | ||| ||||| || || || || ||||| | |||||| | |||| Sbjct 301216 GAGAGATCCTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACAAGTCGGTTG 301157 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | || || || |||||||| Sbjct 301156 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTAACCTCGAAGATACCC 301097 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | || | ||| ||||| || ||||||||||| || || || ||||| ||| Sbjct 301096 TCCTCAATGGTCAAGAGCGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGAACG 301037 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || |||||||| ||||| || || || || || || Sbjct 301036 TTGCGCTCACCCTCGGCCTTCTTGTCAAGACCGTAGGCGATGGCGGCAGCGGTAGGCTCG 300977 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || || ||||| ||||| || | || || || || |||||||| Sbjct 300976 TTGATGATTCGGAGGACGTTCATGCCAGAGATGAGACCGGCGTCCTTAGTAGCTTGTCGC 300917 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| || || || | ||| |||| ||||| | ||| || Sbjct 300916 TGAGAATCGTTGAAGTAGGCGGGAACAGTGATGACAGCGTTGGTGACAGTGCCACCAAGG 300857 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 |||| || ||| | || ||| ||| | || ||||| || || ||||| || | | Sbjct 300856 TACGCCTCGGCGGTCTCACGCATCTTGTTGAGGACCATAGAGGAGATCTCCTCGGGAGTG 300797 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC-CGGG 7875 ||||| ||| ||||| || | || || || || || || || || | | | Sbjct 300796 AACTGCTTCTGCTCACCCTTGTACTCCACCTCGATGATAGGCTT----GCCGTTCTTGTC 300741 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 | ||||| | | | | ||||| || | || |||| ||| | ||||||| Sbjct 300740 AACGACCTTGAAGGGGAAGTGCTTCATGTCAGCCTGAACCTCGCTGTCGGTGAACTTTCG 300681 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||| || | |||||| || || || || ||||| | ||||||||||| |||||||| Sbjct 300680 TCCAATCAAACGCTTGGCGTCGAAGACGGTGTTCTGAGGGTTCATGGCGACCTGGTTCTT 300621 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || ||||| | || || | ||||| || || ||| | || || || || Sbjct 300620 GGCGGCATCACCGATCAATCGCTC---CGTGTCCGTGAAGGCCACGAAGGAAGGTGTGGT 300564 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 ||| || |||||||| || ||||| || || | ||||||| | | |||| ||||| || Sbjct 300563 TCGGTTACCTTGGTCATTGGCAATGATCTCGATACGGTCGTCTCGGAAGACACCGACACA 300504 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || || ||||| |||| ||| Sbjct 300503 AGAGTAGGTCGTGCCCAAGTCAATTCCGACTGC 300471 >seq28 Length=396709 Score = 192 bits (212), Expect = 7e-44 Identities = 371/543 (68%), Gaps = 11/543 (2%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAACG 7301 || ||||| ||||| |||||||| || ||| | | |||||| |||||||| | | || Sbjct 249831 AGGTCCTCGAAACGGGCACGGGTGATCTGGAGGAA--GAAATCCTCGCCGTCGAACAGCG 249774 Query 7302 AATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 | || || |||||||| || || || ||| | || | |||||||| |||||||| || Sbjct 249773 AGTCGATCTCAATGGTGGTCTGGGCACCGTTG--GAAAGGGTTCGCTTGGCGCGCTCGCA 249716 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 || ||||| | | |||||||||||||||| ||| ||||| ||||| || || Sbjct 249715 AGCAGTTCGAAGTCTTCGAAGGGCACGCGGGTCGCCGCTGATATCCTTCTTGGTCTTGCG 249656 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || || || | | |||| |||||| | | |||||||| | |||||| | || Sbjct 249655 TTGGAAGTCCTTCTTGCAGTGGTCAAGGAGGTTGGTGTCGAAATCCTGACCACCAAGATG 249596 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| |||| ||| |||| ||||||| | || || Sbjct 249595 GGTGTCACCAGCGGTGGCCTTGACGGTGAAGACACCACCTTGGATGTTTAGGAGGGATAC 249536 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGTT 7596 ||| || ||||||||||| || || | || || ||||| | | || | ||||| Sbjct 249535 ATCGAAAGTACCACCACCAAGATCGTAGATCAGAACGTTACGCTCCTTGTTGGACTTGTT 249476 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 | | | ||||| || || || || || || || || || || ||||| || ||| Sbjct 249475 GGAACCCAAGCCGTAAGCAATGGCGGCGGCAGTGGGCTCGTTGATGATACGGAGGACGTT 249416 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || |||| || | | ||||| || || ||||| || || ||||| |||||||| Sbjct 249415 AAGTCCAGTGATGGCACCAGCATCCTTAGTGGCTTGACGCTGGTTGTCGTTGAAGTAGGC 249356 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 ||||| || | ||| || | | || ||||| ||||| | | || || || || || Sbjct 249355 AGGGACGGTGATGACAGCCTTCTCAACCTTCTTTCCGAGCTTGGTCTCGGCAATCTCCTT 249296 Query 7777 CAT 7779 ||| Sbjct 249295 CAT 249293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125662695160