Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq21 212 8e-50 seq3 138 1e-27 >seq21 Length=436828 Score = 212 bits (234), Expect = 8e-50 Identities = 1145/1795 (64%), Gaps = 55/1795 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || |||||||| || || ||| |||| ||| Sbjct 5844 CCGCAGCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGTGACGATGTTGAGAAGGTT 5903 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | | || ||| || |||||| ||| |||| ||| || | || || ||||| Sbjct 5904 ATTCAAACCTACAACTTGATGTCGAACAAGTAC-TTCACCCATGCTTCCCCCACTCTCTT 5962 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||||| || || ||| | | || |||| || ||||| | | | ||||| || Sbjct 5963 TAACGCCGGAACGCCACAAGCACAGTTGTCTTCCTGCTTCCTCGTCGATATGAAGGATGA 6022 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| || |||| |||||| ||||| ||| |||||| Sbjct 6023 CAGCATTGACGGTATCTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 6082 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 |||||| || | ||||||| | || | || | | ||| ||| || || || Sbjct 6083 TGGTATTGGTCTCAACATCCACCGTATCCGTGCTACCGGCTCTTATATCGCTGGAACCAA 6142 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 ||| || | || ||| | || |||||||| || || || ||| || | || || Sbjct 6143 CGGTACCTCGAACGGAATTGTACCCATGCTTCGTGTCTTCAATAACACTGCTAGATACGT 6202 Query 111971 AAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | ||| |||| || || |||| |||| |||||||| ||||| Sbjct 6203 TGACCAGGGTGGCAA---CAAGAGACCTGGTGCCTTCGCCATCTACCTTGAGCCTTGGCA 6259 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 | ||||| || | |||||||| || | || ||||| || | ||||| | || Sbjct 6260 CTCGGATGTCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGTGC 6319 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 ||| ||||| |||| |||||||||||||| || || ||||||||| | || ||| ||| Sbjct 6320 CCGTGATCTTTTCTTGGCTCTCTGGATTCCCGACCTTTTCATGAAGCGTGTCGAGAAGAA 6379 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 ||| | ||| || | | || || || || || || || | |||| | || || Sbjct 6380 CGGCGAGTGGACTTTGATGTGCCCCAACGAGTGCCCTGGCCTAGCTGATGTCTACGGCGA 6439 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTG 112262 |||||||| || | ||| |||||| |||| ||| ||| ||| | || || | | Sbjct 6440 CGAGTTTGAGGCTTTGTACGAAAAGTATGAGGCTGAAGGTC--GCGGCCGCCAGAAGAT- 6496 Query 112263 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321 | || || || | ||||| | || ||||| || | || ||||| || || | || | Sbjct 6497 CAAGGCGCAGAAGCTGTGGTATGCCATTCTTGAGGCCCAGACCGAAACCGGAAACCCCTT 6556 Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 112381 ||||||||||| || ||| |||| ||||| || |||||||| | ||| || Sbjct 6557 CATGCTTTACAAGGATCACTGCAACCGTAAGAGCAACCAAAAGAACCTTGGTACTATTCG 6616 Query 112382 GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 112441 || |||||||| || || || || | || | | | |||||| ||||| || Sbjct 6617 CAGCTCCAACCTGTGCACTGAGATTATCGAGTACTCGGCGCCTGATGAGGTCGCTGTCTG 6676 Query 112442 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGAT 112499 ||| | || || ||||||| || | || ||| | | || | | || | || Sbjct 6677 CAACTTGGCTTCTCTCGCTCTGCCGTCTTTCGTTGAT-TATA-ACGAGGGCAACTACGAC 6734 Query 112500 TATGAAAAACTCCACGAAGT--TACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557 | | || | ||||| || ||| | |||| ||||| |||||| | || | Sbjct 6735 TTCCAGAAGTTGCACGATGTCGTAC--AGGTTGTCGTCCGTAACCTGAACAGAATCATCG 6792 Query 112558 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || || | ||||| || | ||||| || || ||| |||||||||| |||| Sbjct 6793 ATGTCAACTACTACCCTGTCCCGGAGGCTCGCAACAGCAACATGCGACACCGTCCCATTG 6852 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT-GATTC 112675 |||| ||||| || ||||| || || ||| | | ||| || || || ||| || || Sbjct 6853 GTCTTGGTGTTCAGGGTCTTGCTGACACTTTCTTGGCATTG-CG-CATGCCTTTCGAGTC 6910 Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735 || || | | | || || || || ||||| || || || | || ||||| Sbjct 6911 GCCTGAGGCCAGACAGCTGAACAAGCAAATTTTCGAGACCATCTACCATGGTGC-CTTGA 6969 Query 112736 -GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 || |||| | || ||||||| ||| | || |||| ||||| || || | Sbjct 6970 CTGCCTCCATGGAGATTGCCAAGGTTGAGGGTACCTACTCCACCTACGAGGGCTCCCCTG 7029 Query 112795 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTAC 112850 || ||||| | ||||| | || |||| |||| || | | || | ||| | Sbjct 7030 TCTCCCAAGGTATTCTTCAGTACGACATGT-GGAATGTCACGCCGTCCGATCTT---TGG 7085 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 || ||| | |||||||||| |||||| |||| ||| | || |||||||| ||| | Sbjct 7086 GATTGGACCAGCCTCAAGGAACAGATCAAGCAGAATGGTGTACGCAACAGTCTGTTGGTC 7145 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||| || ||| ||| | || || ||||||| || || || || || || Sbjct 7146 GCTCCTATGCCCACTGCCAGCACATCCCAGATTCTGGGTAACAACGAGTGTTTCGAGCCT 7205 Query 112971 TACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 113029 ||||| |||||||||| ||| | | || || || ||||| | | || ||| Sbjct 7206 TACACTTCGAACATCTACTCT-CGTCGTGTGCTTGCTGGTGAGTTCCAGGTCGTTAACCC 7264 Query 113030 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCT 113086 || | | ||||| || || |||||||||||| | | |||||| | | | Sbjct 7265 TTGGCTTCTTAAGGACCTTGTCGATATGGGTCTCTGGTCCGATGGCATGAAGAACCGTAT 7324 Query 113087 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146 ||| | || || ||||| |||| || ||| | ||||| || || ||| Sbjct 7325 CATTGCCGAA---GGCGGTTCTGTTCAGAACATTCCTAACATTCCTACCGACATCAAGGC 7381 Query 113147 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 113206 | | ||| || |||||||||||| ||| || || | ||||| || || || Sbjct 7382 GCTCTACAAGACGGTTTGGGAAATCTCCCAGAAAACAGTTGTTCAGATGGCTGCTGACCG 7441 Query 113207 TGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG-GAAAGTCCAACGAT 113263 |||| |||||||||||| || ||| |||| | |||| || || || || || Sbjct 7442 TGGTGCGTTCATTGATCAA--TCCCAGTCACTGAACATTCACATGAGAGAG-CCCACCAT 7498 Query 113264 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 113323 | |||| || | |||||| | | |||||| |||||||| || || ||||| Sbjct 7499 GGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGCTCGGTCTCAAGACCGGCATGTA 7558 Query 113324 TTACCTCCG-ATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGA 113377 ||||| || | | ||| | ||| ||| |||||||||| | | || | ||| Sbjct 7559 CTACCTACGTACCCAAGCTGCTGCCGC-CCCTATTCAGTTCACTGTCGACCAAGA 7612 >seq3 Length=1020397 Score = 138 bits (152), Expect = 1e-27 Identities = 120/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||||||| |||||||| | || || || |||||||||||||||||| |||| ||| Sbjct 108463 CCTTTGCTCAGCGACTCATTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCT 108522 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 | | |||| | ||| | |||||||| ||||| ||||| ||||| ||||||||||| Sbjct 108523 TTGCCTCTATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACG 108582 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| ||||||||||||||||| |||||| Sbjct 108583 AGCTCATCTCTCGTGACGAGGGTCTCCAC 108611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620735424407280