Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq21 205 1e-47 seq3 116 4e-21 >seq21 Length=436828 Score = 205 bits (226), Expect = 1e-47 Identities = 1103/1733 (64%), Gaps = 65/1733 (4%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| ||||| || ||||| ||||| |||||| ||||| ||||| | || | || Sbjct 7475 GTTCAGTGACTGGGATTGATCAATGAACGCACCACGGTCAGCAGCCATCT-GAACA-ACT 7418 Query 109560 CTTTT--GGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCC 109617 |||| || |||||||| || |||||||| | |||||| || ||||||| Sbjct 7417 GTTTTCTGGGAGATTTCCCAAACCGTCTTGTAGAGCGCCTTGATGTCGGTAGGAATGTTA 7358 Query 109618 ACGATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGA 109673 ||||| |||| ||| || |||||| || ||| | | |||||| | | || Sbjct 7357 GGAATGTTCTGAACAGAACC----GCCTTCGGCAATGATACGGTTCTTCATGCCATCGGA 7302 Query 109674 CCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTT---GTTGACCACGACAAATTC 109730 ||||||||| | | | || | ||| |||| || ||| || || || || Sbjct 7301 CCAGAGACCCA---TATCGACAAGGTCCTTAAGAAGCCAAGGGTTAACGACCTGGAACTC 7245 Query 109731 ACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTT 109790 ||||||||| || || ||||||||| | ||||| || ||||||||||| ||||| Sbjct 7244 ACCAGCAAGCACACGACGAGAGTAGATGTTCGAAGTGTAAGGCTCGAAACACTCGTTGTT 7185 Query 109791 GCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAG 109850 || || || || | ||| || |||||||| ||||| | | |||||||| || | Sbjct 7184 ACCCAGAATCTGGGATGTGCTGGCAGTGGGCATAGGAGCGACCAACAGACTGTTGCGTAC 7125 Query 109851 ACCCTTCGTCTTTACCCGCTCACGCATTGCGTC----CCAATCATAACGACC--ACTAAA 109904 ||| ||| ||| | | | || ||| | | |||||| || || | || Sbjct 7124 ACCATTCTGCTTGATCTGTTCC----TTGAGGCTGGTCCAATCCCAAAGATCGGACG--- 7072 Query 109905 TTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTT 109964 | | || || |||||| || ||||| | ||| | | |||| || |||| Sbjct 7071 ----GCGTGAC-ATTCCACATGTCGTACTGAAGAATACCTTGGGAGACAGGGGAGCCCTC 7017 Query 109965 GAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCC--TCTAGTGCCGCA 110022 | | | ||| | |||||||||| ||| | ||| ||| || | || || || || Sbjct 7016 GTAGGTGGAGTAGGTACCCTCAACCTTGGCAATCTCC-ATGGAGGCAGTCAAG-GCACCA 6959 Query 110023 TGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGA 110082 || || || ||||| ||||| || |||| | | | ||| | ||||| || Sbjct 6958 TGGTAGATGGTCTCGAAAATTTGCTTGTTCAGCTGTCTGGCCTCAGGCGACTCGAAAGGC 6899 Query 110083 AGACCACAAAG--AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGAT 110140 | | ||| | || ||| || || |||||||||||||| ||||||||||| || | Sbjct 6898 ATGCG-CAATGCCAAGAAAGTG-TCAGCAAGACCCTGAACACCAAGACCAATGGGACGGT 6841 Query 110141 GCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGAT 110200 | |||||| | ||||| || ||||| ||||| ||||||| | | Sbjct 6840 GTCGCATGTTGCTGTTGCGAGCCTCCGGGACAGGGTAGTAGTTGACATCGATGATTCTGT 6781 Query 110201 TGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCG 110260 | || || ||| || || || || | || | | | ||| | ||| | Sbjct 6780 TCAGGTTACGGACGACAACCTGTACGACATCGTGCAACTTCTGGAAGTCGTA-GTTGCCC 6722 Query 110261 TC-TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCG 110319 || | | || || | || ||||| | ||| || | ||||| |||| ||| Sbjct 6721 TCGTTATAATCAACGAAAGACGGCAGAGCGAGAGAAGCCAAGTTGCAGACAGCGACCTCA 6662 Query 110320 TCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAG 110379 || | | ||| || | ||| || || |||| |||||| || ||| ||| | | Sbjct 6661 TCAGGCGCCGAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCAAGG 6602 Query 110380 TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTT 110439 ||||| || || || |||||| |||||| || |||||| | ||| | || ||| Sbjct 6601 TTCTTTTGGTTGCTCTTACGGTTGCAGTGATCCTTGTAAAGCATGAAGGGGTTTCCGGTT 6542 Query 110440 TCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGC 110498 || ||||| | || |||||||| | ||| | | || ||| | | | || | | Sbjct 6541 TCGGTCTGGGCCTCAAGAATGGCATACCACAGCTTCTGCGCCTTGATCTTCTG-GCGGCC 6483 Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558 | ||||||| |||| ||||| |||||| ||||||| || | ||||| ||||||| Sbjct 6482 GCGACCTTCAGCCTCATACTTTTCGTACAAAGCCTCAAACTCGTCGCCGTAGACATCAGC 6423 Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618 || || || || ||| || | | | ||| | || || ||| || | ||| Sbjct 6422 TAGGCCAGGGCACTCGTTGGGGCACATCAAAGTCCACTCGCCGTTCTTCTCGACACGCTT 6363 Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATC 110678 |||||| ||||| |||||||| | ||| ||||||| |||||| ||| | || || | Sbjct 6362 CATGAAAAGGTCGGGAATCCAGAGAGCCAAGAAAAGATCACGGGCACGGACTTCCTCCTT 6303 Query 110679 ACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA 110738 || ||||| ||| || || | || || | || |||||||||||| || || || || Sbjct 6302 GCCGTGGTTCTTGCGAAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAAGGTA 6243 Query 110739 GACAGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCAT 110794 || |||| || || || | | || |||||| ||| || | || ||| || Sbjct 6242 GATGGCGAAGGCACCAGGTCTCTTGTTG-CCACCCTGGTCAACGTATCTAGCAGTGTTAT 6184 Query 110795 TGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGG 110854 ||||||| | ||||| || | |||||| | || ||| || || || || | Sbjct 6183 TGAAGACACGAAGCATGGGTACAATTCCGTTCGAGGTACCGTTGGTTCCAGCGATATAAG 6124 Query 110855 ACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTT 110914 | | ||||| || |||||| | | |||||||||||| ||| ||| || Sbjct 6123 AGCCGGTAGCACGGATACGGTGGATGTTGAGACCAATACCACCAGCCATCTTGGAGATCA 6064 Query 110915 GTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATT 110973 ||||| ||| |||| ||| | || ||||| ||||| || |||| | | | Sbjct 6063 TGGCACAGGTCT-TGAGGGTATCGTAGATACCGTCAATGCTGTCATCCTTCATATCGACG 6005 Query 110974 AGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCA 111033 || ||||| ||||||| ||| | | |||||||| || || ||||| || || | ||| Sbjct 6004 AGGAAGCAGGAAGACAACTGTGCTTGTGGCGTTCCGGCGTTAAAGAGAGTGGGGGAAGCA 5945 Query 111034 TGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTT 111091 || ||| || |||| |||||| |||||| || | | | ||||| | Sbjct 5944 TGGGTGA--AGTACTTGTTCGACATCAAGTTGTAGGTTTGAATAACCTTCTCAACATCGT 5887 Query 111092 TACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTC 111151 ||| ||||| | |||||| ||||||| ||| | || || | || | | ||| Sbjct 5886 CACCCCAGATACCGACGGCAACACGCATGATCATGTGCTGCGGTCTCTCTACAATCTTCT 5827 Query 111152 CATCAACACGCT---GAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 |||||| ||| | | |||| ||| | |||||||| |||||||||| Sbjct 5826 CATCAA---GCTTGAGCAAGTAAGATCGCTCCAAGGTCTTGAAACCAAAGTAT 5777 >seq3 Length=1020397 Score = 116 bits (128), Expect = 4e-21 Identities = 385/590 (65%), Gaps = 9/590 (2%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 |||||||| || | ||| |||||||| || ||||| ||| |||| |||||||| ||||| Sbjct 108910 TAGTCACCGACTCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 108851 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || |||| ||| | | |||| |||| || ||||| Sbjct 108850 AAGTCGAAGGGGTTGCTGGAACGGTAGACCTTCTCGTTG-CCAAGGGCGACCAACAGACG 108792 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 || | ||| ||||||| || | |||| | || ||||| || | || || Sbjct 108791 GTCAGCGACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGAAGGGCGCA 108732 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446 || | ||| || | ||| | |||||| || | || || || | | ||| | Sbjct 108731 GGGCAAAGCCTCAGTCAAGAACTCCTTCTCAATGACAACGGCATCGGTGATGATCTTCTC 108672 Query 119447 AAT-AGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCTT 119505 ||| || | || | ||| ||| ||| | | |||| | ||| || || Sbjct 108671 AATGAGGTCCTTGCC-TGGGCGGTTCTTCAGGTGAGAGAACAGCAGGCAGGCGAAGTCAG 108613 Query 119506 GATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTC 119565 || || || || || |||||||||||||| || |||| ||| || ||||| || | Sbjct 108612 TGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGAC 108553 Query 119566 CTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACAC 119625 | | ||||| | ||| ||||| | ||| ||| |||||||| ||||| || Sbjct 108552 CACGCTTCTTCAACCAGAAGATAGAGGCAAAGGCACCACTGAAGAAGATACCCTCAACGG 108493 Query 119626 AGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGA-CTTGTC---GAACCACTTGAGA 119681 ||||| || | || |||| |||||| ||| || |||||| || ||| | |||| Sbjct 108492 CAGCGAAGGCAATGAGTCGCTGAGCAAA-GGTAGACTTCTTGTCAGCGATCCATTGGAGA 108434 Query 119682 GCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTC 119741 ||||||| |||||||| |||||||||| || | ||||| | ||| || || || Sbjct 108433 GCCCAGTCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAAGAGATGGGTC 108374 Query 119742 TTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTC 119791 || | || ||||| || || |||||||||| |||||| ||||| Sbjct 108373 TTCTGGGCGGGCTCCTTGATGTAGGTATCAATGAGAAGAGAGTACGTCTC 108324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588969381382200