Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq55 127 2e-24 >seq55 Length=215664 Score = 127 bits (140), Expect = 2e-24 Identities = 183/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791 || || |||||| || ||||| | || || |||||| |||||| | || ||||| Sbjct 161293 GGAGAATGGGGAGCAGACATTGCATTCGGAAGCGCGCAAAGATTTGGTGTGCCATTGGGA 161234 Query 153792 TATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 153851 | ||||| || |||||||| |||||||| || ||| ||||||||||||| || Sbjct 161233 TTCGGAGGCCCCCATGCTGCCTTCTTTGCTGTTCAGGAAAAGCATAAGAGAAAGATGCCC 161174 Query 153852 GGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTA 153911 || | | |||||| || || | |||| ||||||||||| | |||||||| Sbjct 161173 GGTCGGTTGATAGGTCTCTCCAAGGACCGATTAGGTGATAAAGCATACCGCTTAGCACTG 161114 Query 153912 CAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAG 153971 || ||| ||||||| || || | ||||| || ||||| || ||| | |||||| | ||| Sbjct 161113 CAAACTCGAGAGCAACACATTCGAAGAGAGAAGGCAACTAGCAACGTGTGCACATCACAG 161054 Query 153972 GCACTGCTGGCTAATATG 153989 || |||| || || ||| Sbjct 161053 GCGTTGCTAGCAAACATG 161036 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 153210 GGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAAT 153269 || ||||| ||||||||||| ||||| || ||||| || || |||||||| ||||| Sbjct 161845 GGCCAAGGCTACTATGGAACTCACACACCGCCCGTCATCCAACGGAACGTTCTCGAGAAC 161786 Query 153270 CCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAA 153329 || ||||||||| ||| || || || ||| | ||||| || || | || || Sbjct 161785 CCGGCATGGTACACAAGTTATACCCCTTACCAACCAGAGATTAGCCAAGGTCGCTTAGAG 161726 Query 153330 GCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCA 153389 || || | || | |||||| | | || || || || ||| | | || || ||||| Sbjct 161725 TCTCTAGTTAACTTCCAAACTGTTGTTACGGATCTCACGGGACTTTCCATTGCCAACGCC 161666 Query 153390 TCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 ||| | ||||| | ||||||||| || ||||| ||| Sbjct 161665 AGTCTTCTTGATGAGGGAACTGCAGCTGCCGAAGCCATG 161627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579206291096160