Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq55 141 1e-28 >seq55 Length=215664 Score = 141 bits (156), Expect = 1e-28 Identities = 186/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 158407 GGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 158466 || || |||||| |||||||| | || || |||||| |||||| | || ||||| Sbjct 161293 GGAGAATGGGGAGCAGACATTGCATTCGGAAGCGCGCAAAGATTTGGTGTGCCATTGGGA 161234 Query 158467 TACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 158526 | |||||| || |||||||| |||||||| || ||| ||||||||||||| || Sbjct 161233 TTCGGAGGCCCCCATGCTGCCTTCTTTGCTGTTCAGGAAAAGCATAAGAGAAAGATGCCC 161174 Query 158527 GGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTA 158586 || | | |||||| || || | |||| ||||||||||| | |||||||| Sbjct 161173 GGTCGGTTGATAGGTCTCTCCAAGGACCGATTAGGTGATAAAGCATACCGCTTAGCACTG 161114 Query 158587 CAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAA 158646 || ||| ||||||| || || ||||||| || ||||| || ||| | |||||| |||| Sbjct 161113 CAAACTCGAGAGCAACACATTCGAAGAGAGAAGGCAACTAGCAACGTGTGCACATCACAG 161054 Query 158647 GCACTGCTGGCTAATATG 158664 || |||| || || ||| Sbjct 161053 GCGTTGCTAGCAAACATG 161036 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 157885 GGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAAT 157944 || ||||| ||||||||||| |||||| || ||||| || || |||||||| ||||| Sbjct 161845 GGCCAAGGCTACTATGGAACTCACACACCGCCCGTCATCCAACGGAACGTTCTCGAGAAC 161786 Query 157945 CCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAA 158004 || ||||||||| ||| || || || ||| | ||||| || || | || || Sbjct 161785 CCGGCATGGTACACAAGTTATACCCCTTACCAACCAGAGATTAGCCAAGGTCGCTTAGAG 161726 Query 158005 GCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCA 158064 || || | || | |||||| | | || || ||||| ||||| | || || ||||| Sbjct 161725 TCTCTAGTTAACTTCCAAACTGTTGTTACGGATCTCACGGGACTTTCCATTGCCAACGCC 161666 Query 158065 TCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 ||| | ||||| | ||||||||| || ||||| ||| Sbjct 161665 AGTCTTCTTGATGAGGGAACTGCAGCTGCCGAAGCCATG 161627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588044591774640