Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq21 322 9e-83 seq3 217 3e-51 >seq21 Length=436828 Score = 322 bits (356), Expect = 9e-83 Identities = 1073/1638 (66%), Gaps = 80/1638 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | |||||||| | ||| ||||| ||||||||||||||||| Sbjct 7603 ACAGTGAACTGAATAGGGGCGGCAGCAGCTTGGGTACGTAGGTAGTACATGCCGGTCTTG 7544 Query 212613 AGGCC---CTTGCCCCAGCC-GTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATAT 212667 || || ||| |||||| ||| | |||||| |||| ||| |||| | || Sbjct 7543 AGACCGAGCTT---CCAGCCAGTGAA-GTGCAT-GCTGGTGA---TCTTGCCC-----AT 7497 Query 212668 TCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGG 212727 ||| | ||| || || | |||||| ||||| || || ||||| | Sbjct 7496 GGTGGGCTCTCTCATG-------TGAATGTTCAGTGACTGGGATTGATCAATGAACGCAC 7444 Query 212728 CCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGA 212787 | | |||||| ||||| | | | | ||||||||| ||||| || |||||| ||| Sbjct 7443 CACGGTCAGCAGCCATCTGAACAACTGTTTTCTGGGAGATTTCCCAAACCGTCTTGTAGA 7384 Query 212788 TTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC-CCTGTGT--ATGG 212844 | |||| ||| || | | || |||||||| ||||| || ||| | ||| Sbjct 7383 GCGCCTTGATGTCGGTAGGAATGTTAGGAATGTTCTGAACAGAACCGCCTTCGGCAATGA 7324 Query 212845 TCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGT 212904 | | | | |||| | ||| |||||| ||| | | ||| ||| | || Sbjct 7323 TACGGTTCTT---CATGCCATCGGACCAGAGACCCATATCGACAAGGTCCTTAAGAAGCC 7267 Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964 |||||| || | |||||| ||||| | ||||| | | ||| | ||| ||||||| Sbjct 7266 AAGGGTTAACGACCTGGAACTCACCAGCAAGCACACGACGAGAGTAGATGTTCGAAGTGT 7207 Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024 | ||||||| | ||||||||| ||||||||||| | |||||||| |||||||| |||| Sbjct 7206 AAGGCTCGAAACACTCGTTGTTACCCAGAATCTGGGATGTGCTGGCAGTGGGCATAGGAG 7147 Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAG 213083 | |||| |||||||| | || || | || ||| | | || ||| | ||| Sbjct 7146 CGACCAACAGACTGTTGCGTACACCATTCTGCTTGATCTGTTCCTTGAGGCTG-GTCCAA 7088 Query 213084 TCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143 ||||| ||| || | ||| || ||||||||||| |||| | || ||| Sbjct 7087 TCCCAA-----AGATCGGACGGCGTG----ACATTCCACATGTCGTACTGAAGAATACCT 7037 Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203 | | || ||| ||||| ||| | |||||||| || | ||||||| | ||| | Sbjct 7036 TGGGAGACAGGGGAGCCCTCGTAGGTGGAGTAGGTACCCTCAACCTTGGCAATCTCCATG 6977 Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263 || || || |||| | | ||||||||| || || || | | |||| |||| ||||| Sbjct 6976 GAGGCAGTCAAGGCACCATGGTAGATGGTCTCGAAAATTTGCTTGTTCAGCTGTCTGGCC 6917 Query 213264 TCTGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322 || || ||| ||| ||||| || ||| | || ||||| || ||||| || || Sbjct 6916 TCAGGCGACTCGAAAGGCATGCGCAATGCCAAGAAAGTG-TCAGCAAGACCCTGAACACC 6858 Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGT 213381 | || ||||| | ||||| || ||| ||| |||| |||| | ||||| ||| Sbjct 6857 AAGACCAATGGGACGGTGTCGCATGTTGCTGTTGCGAGC-CTCCGGGACAGGGTAGTAGT 6799 Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441 || |||||||| |||| ||||| ||| | | || | ||||| | || ||| Sbjct 6798 TGACATCGATGATTCTGTTCAGGTTACGGACGACAACCTGTACGACATCGTGCA---ACT 6742 Query 213442 CGTGATTGAACACGTAG---CCCCCGTCCTGCACAAACTCAG---GCAGGGCGATGCTGG 213495 || ||| ||||| ||| ||| | ||| || |||| |||| | Sbjct 6741 TCTG---GAAGTCGTAGTTGCCCTCGTTATAATCAACGAAAGACGGCAGAGCGAGAGAAG 6685 Query 213496 CCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555 ||| |||||| || || ||||| | || | | |||||| || ||||| |||||||||| Sbjct 6684 CCAAGTTGCAGACAGCGACCTCATCAGGCGCCGAGTACTCGATAATCTCAGTGCACAGGT 6625 Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTG 213614 || || || || || || ||||||| ||||| ||| |||| ||| ||||||| Sbjct 6624 TGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTACGGTTG-CAGTGATCCTTG 6566 Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGT 213672 || |||||| ||||| ||||| || ||||| | | || || ||| ||| || | Sbjct 6565 TAAAGCATGAAGGGGTTTCCGGTTTCGGTCTGGGCCTCAAGAAT--GGCATACCACAGCT 6508 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGC 213731 | ||||||| | | || | || || | | |||||| |||| |||||| | Sbjct 6507 TCTGCGCCTTGATCTTC----TGGCGGCCGCGACCTTCAGCCTCATACTTTTCGTACAAA 6452 Query 213732 TCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGG 213791 | | || |||| ||| |||| | || || || || ||| ||||| | Sbjct 6451 GCCTCAAACTCGTCGCCGTAGACATCAGCTAGGCCAGGGCACTCGTTGGGGCACATCAAA 6392 Query 213792 CTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGT 213850 |||| || |||| | |||| ||| | || |||||| ||||| || | ||| || || Sbjct 6391 GTCCACTCGCCGTTCTTCTC-GACACGCTTCATGAAAAGGTCGGGAATCCAGAGAGCCAA 6333 Query 213851 GAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTC 213910 ||| || || | || | || ||| || ||| ||||| || || || || || Sbjct 6332 GAAAAGATCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTC 6273 Query 213911 AAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CC 213967 |||| |||| |||||| ||||| | ||||||||| ||||| || || |||||| || Sbjct 6272 GAAGACATCCGAGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACCAGGTCTCTTGTTGCC 6213 Query 213968 GCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTT 214027 |||||||| || || || | ||||||| || || | |||||| | ||||| Sbjct 6212 ACCCTGGTCAACGTATCTAGCAGTGTTATTGAAGACACGAAGCATGGGTACAATTCCGTT 6153 Query 214028 GGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGA 214084 || ||||||||||| || ||||| ||||||| || | | ||| | ||| Sbjct 6152 CGAGGTACCGTTGGTTCCAGCGATATAAGAGCCGGTAGCACGGATACGGTGG---ATGTT 6096 Query 214085 GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGAT 214144 ||| || || ||||| || ||||||||||||||| ||| | | | || || ||| Sbjct 6095 GAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAGAT 6036 Query 214145 GCCGGCCATGCTGTCATC 214162 ||| | ||||||||||| Sbjct 6035 ACCGTCAATGCTGTCATC 6018 >seq3 Length=1020397 Score = 217 bits (240), Expect = 3e-51 Identities = 496/739 (67%), Gaps = 33/739 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || |||| ||||| |||||||| ||||| || | | |||||||||||| Sbjct 108913 TGGTAGTCACCGACTCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCC 108854 Query 47900 ATGAAGAGGAAGGGGTTG--GGTGTGTTATACA--CCCGTGTC--AGGCCCATCTGTTCC 47953 |||||| |||||||||| || | || || | ||| | ||| | | || Sbjct 108853 ATGAAGTCGAAGGGGTTGCTGGAACGGTAGACCTTCTCGTTGCCAAGGGCGA------CC 108800 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 | ||| | || |||||| |||||||||| | ||| | | || ||||||||| | Sbjct 108799 AACAGACGGTCAGCGACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGA 108740 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 |||| ||||||||||| || | ||||||||||| || ||||| || | Sbjct 108739 AGGGCGCAGGGCAAAGCCTCAGTCAAGAACTCCTTCTCAATGACAACGGCATCGGTGATG 108680 Query 48074 ATCTGCTTAACGCGGGACT---CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG 48130 |||| || || | || || ||| | | || || |||||| | | |||| | Sbjct 108679 ATCTTCTCAATGAGGTCCTTGCCTGGGCGGTTCTT---CAGGTG---AGAGAACAGCAGG 108626 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||| ||||| |||| | || ||||| || ||||||| ||||||||||| ||| Sbjct 108625 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 108566 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | || | || || | |||||| || | || || | ||| ||||||| Sbjct 108565 CCGGGCATCAGACCACGCTTCTTCAACCAGAAGATAGAGGCAAAGGCACCACTGAAGAAG 108506 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || |||| | || | || | || |||||||| | | Sbjct 108505 ATACCCTCAACGGCAGCGAAGGCAATGAGTCGCTGAGCAAAGGTAGACTTCTTGTCAGCG 108446 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| || |||||||| ||||| |||||| || || || || ||||| | Sbjct 108445 ATCCATTGGAGAGCCCAGTCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTG 108386 Query 48371 AAGAGCT---TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCG 48424 ||||| | |||| || | | ||| | ||||| | |||| || | | Sbjct 108385 AAGAGATGGGTCTT---CTGGGCGGGCTCCTTGATGTAGGTATCAATGAGAAG---AGAG 108332 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||| |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| Sbjct 108331 TACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCG 108272 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 | ||| ||||| | ||||| ||| | || ||||| ||||| || || || || Sbjct 108271 GGGATCTGAACTTCACCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAC 108212 Query 48545 GCAGCAAAGAAGGCAAGGA 48563 || || ||||||||||||| Sbjct 108211 GCGGCGAAGAAGGCAAGGA 108193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931522331900160