Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-17 >seq1 Length=1159409 Score = 107 bits (118), Expect = 1e-17 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || ||||| || || ||| ||| || || || || || | ||| || Sbjct 849833 ACGGAGACGAAGGACAAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGATAGGGT 849892 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || | || ||||||||||| || || || || ||||| ||||| || || ||||| || Sbjct 849893 TCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCC 849952 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| ||||||||| |||||| || || || || | | | | || | Sbjct 849953 TTCCTTGTCCTGAATCTTTGACTTGACATTGTCGATTGTGTCGGACGACTCGA-CCTCGA 850011 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 ||||||| || || |||||||| ||||| |||| Sbjct 850012 GGGTAATGGTCTTTCCGGTGAGGGTCTTGACGA 850044 Score = 107 bits (118), Expect = 1e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| || || || || || || | || ||||| | ||||| Sbjct 850122 ACGGAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTTTGGATGTTGTAATCCGACAGAGT 850181 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| ||||| ||||| ||||| ||||| | || ||||| || ||||| || || Sbjct 850182 GCGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACC 850241 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| |||||||| |||||| |||||||| || | | ||||| Sbjct 850242 CTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATAGTGTCGGAGGACTCGACCTCAAG 850301 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||||||||| ||||| || || Sbjct 850302 AGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTG 850340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268140637528052