Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq55 141 1e-28 >seq55 Length=215664 Score = 141 bits (156), Expect = 1e-28 Identities = 186/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||| ||||| |||| || |||| |||||| | ||| || ||||| || ||||||| ||| Sbjct 161036 CATGTTTGCTAGCAACGCCTGTGATGTGCACACGTTGCTAGTTGCCTTCTCTCTTCGAAT 161095 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 || ||||||| |||||| |||||||| | |||||| || ||| | |||| || Sbjct 161096 GTGTTGCTCTCGAGTTTGCAGTGCTAAGCGGTATGCTTTATCACCTAATCGGTCCTTGGA 161155 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 |||||| | | || || ||||||||||||| ||| || |||||||| || Sbjct 161156 GAGACCTATCAACCGACCGGGCATCTTTCTCTTATGCTTTTCCTGAACAGCAAAGAAGGC 161215 Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAAT 139537 |||||| || |||||| |||||| || | |||||| |||||| || || | ||||| Sbjct 161216 AGCATGGGGGCCTCCGAATCCCAATGGCACACCAAATCTTTGCGCGCTTCCGAATGCAAT 161275 Query 139538 ATCAAATCCCCACTCACC 139555 || |||||| || || Sbjct 161276 GTCTGCTCCCCATTCTCC 161293 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || ||||||||| | ||||| | ||| ||||| || || | | ||| Sbjct 161627 CATGGCTTCGGCAGCTGCAGTTCCCTCATCAAGAAGACTGGCGTTGGCAATGGAAAGTCC 161686 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || || || || | | |||||| | || | || || || || | || || || Sbjct 161687 CGTGAGATCCGTAACAACAGTTTGGAAGTTAACTAGAGACTCTAAGCGACCTTGGCTAAT 161746 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 ||| | ||| || || || ||| ||||||||| || ||||| |||||||| || || Sbjct 161747 CTCTGGTTGGTAAGGGGTATAACTTGTGTACCATGCCGGGTTCTCGAGAACGTTCCGTTG 161806 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACC 140077 ||||| || ||||| ||||||||||| ||||| || Sbjct 161807 GATGACGGGCGGTGTGTGAGTTCCATAGTAGCCTTGGCC 161845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578991893505480