Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq21 136 5e-27 seq3 91.5 2e-13 >seq21 Length=436828 Score = 136 bits (150), Expect = 5e-27 Identities = 555/864 (64%), Gaps = 17/864 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || || |||| ||| || || || |||| || Sbjct 5844 CCGCAGCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGTGACGATGTTGAGAAGGTT 5903 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | | || ||| || |||||| | | ||| |||| || || | || || ||||| Sbjct 5904 ATTCAAACCTACAACTTGATGTCGAACAAGTAC-TTCACCCATGCTTCCCCCACTCTCTT 5962 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 || || || || ||| | | ||| |||| |||||||| ||| | ||||| || Sbjct 5963 TAACGCCGGAACGCCACAAGCACAGTTGTCTTCCTGCTTCCTCGTCGATATGAAGGATGA 6022 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || |||||||||| | || || | | ||||| ||||| ||| |||||| Sbjct 6023 CAGCATTGACGGTATCTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 6082 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | ||||||| | | | || | ||| ||| || || || Sbjct 6083 TGGTATTGGTCTCAACATCCACCGTATCCGTGCTACCGGCTCTTATATCGCTGGAACCAA 6142 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || | || ||| | || |||||||| || || || ||| || | || || Sbjct 6143 CGGTACCTCGAACGGAATTGTACCCATGCTTCGTGTCTTCAATAACACTGCTAGATACGT 6202 Query 75571 AAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGAACCATGGCATG 75626 | || | | ||| | || ||| || |||| ||||| | || || ||||| Sbjct 6203 TGACCAGG-GTGGCAACAAGAGACCTGGTGCCTTCGCCATCTACCTTGAGCCTTGGCACT 6261 Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686 | ||| || | |||||||| || | || ||||| || | || || | || ||| Sbjct 6262 CGGATGTCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAAG-TCCGTGCC 6320 Query 75687 -GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | ||||| || | | || |||||||| ||||||||||||||||| || ||| || Sbjct 6321 CGTGATCTTTTCTTGGCTCTCTGGATTCCCGACCTTTTCATGAAGCGTGTCGAGAAGAAC 6380 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 || | ||| || | | || || || || || || || | || | || || Sbjct 6381 GGCGAGTGGACTTTGATGTGCCCCAACGAGTGCCCTGGCCTAGCTGATGTCTACGGCGAC 6440 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA--- 75862 |||||||| || | ||| ||||||||| | || ||| | | | || | | | Sbjct 6441 GAGTTTGAGGCTTTGTACGAAAAGTATGAGGCTGAAGGTCGCGGC----CGCCAGAAGAT 6496 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || ||| || | | ||| | || ||||| | | ||||| || || |||| || | Sbjct 6497 CAAGGCGCAGAAGCTGTGGTATGCCATTCTTGAGGCCCAGACCGAAACCGGAAACCCCTT 6556 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 ||||||||||||||| || ||| ||||| ||||||||||| | || || || Sbjct 6557 CATGCTTTACAAGGATCACTGCAACCGTAAGAGCAACCAAAAGAACCTTGGTACTATTCG 6616 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 ||||| || || ||||| || ||| | |||||| | | |||||| ||||| || Sbjct 6617 CAGCTCCAACCTGTGCACTGAGATTATCGAGTACTCGGCGCCTGATGAGGTCGCTGTCTG 6676 Query 76042 CAATTTGGCATCAATCGCCCTTCC 76065 ||| ||||| || |||| || || Sbjct 6677 CAACTTGGCTTCTCTCGCTCTGCC 6700 >seq3 Length=1020397 Score = 91.5 bits (100), Expect = 2e-13 Identities = 333/514 (65%), Gaps = 17/514 (3%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 |||||||| || || ||||| | ||||| |||||| | ||||||| | || |||| Sbjct 108105 TGGACTGCCGAGGAGATTGATCTCTCCAAGGATCTTCATGACTGGAGTAACCGATTGAAC 108164 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || | || ||| ||| | ||||||| || ||||| || | |||||| || || Sbjct 108165 GATGACGAGAAGTTTTTCGTCTCCCACATCCTTGCCTTCTTCGCCGCGTCCGACGGCATC 108224 Query 64831 GTTTTTGAGAA---TATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGC 64887 || ||||| | || | | ||| |||| |||||| ||||| ||| || || Sbjct 108225 GTCAACGAGAACCTTGTCGAG--CGATTCAGCGG-TGAAGTTCAGATCCCCGAGGCTCGA 108281 Query 64888 TCATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATT 64946 | ||||||| | || | ||| ||| | | | || ||| || || || | Sbjct 108282 TGCTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACGTACTCTCTTCT 108340 Query 64947 GATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAAC 65006 ||||| | ||||| ||||| | | |||| || | || | ||||| | || Sbjct 108341 CATTGATACCTACATCAAGGAGCCCGCCCAGAAGACCCATCTCTTCAACGCCATTGACAC 108400 Query 65007 TGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACAAAGTC 65063 | || || || ||||| | ||||| | ||||| | ||||| ||||| Sbjct 108401 CATCCCCTGCATCCGCCGTAAGGCTGACTGGGCTCTCCAATGGATCGCTGACAAGAAGTC 108460 Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123 | |||| || |||| || |||| || || || ||||||||||||||| || Sbjct 108461 TA---CCTTTGCTCAGCGACTCATTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGG 108517 Query 65124 GTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 | || | |||| | |||||||||||||| ||||| ||||| || || |||||| Sbjct 108518 TGCCTTTGCCTCTATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTC 108577 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || || || || || |||||||||||| Sbjct 108578 CAACGAGCTCATCTCTCGTGACGAGGGTCTCCAC 108611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562896049120