Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11]
899 sequences; 37,704,138 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq21 176 4e-39
seq1 98.7 9e-16
seq39 93.3 4e-14
>seq21
Length=436828
Score = 176 bits (194), Expect = 4e-39
Identities = 968/1517 (64%), Gaps = 60/1517 (4%)
Strand=Plus/Minus
Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATC 138492
|||||||| || || ||||| ||||| | ||| || | || | ||| || |
Sbjct 7330 GCAATGATACGGTTCTTCATGCCATCGGACCAGAGACCCATATCGACAAGGTCCTTAAGA 7271
Query 138493 AGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTG 138552
|| | ||| | |||||| || ||||| || | || |||||| ||| |||||
Sbjct 7270 AGCCAAGGGTTAACGACCTGGAACTCACCAGCAAGCACACGACGAGAGTAGATGTTCGAA 7211
Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612
||| ||||||| || | |||||||| ||||||||||| | ||| | || || |||||
Sbjct 7210 GTGTAAGGCTCGAAACACTCGTTGTTACCCAGAATCTGGGATGTGCTGGCAGTGGGCATA 7151
Query 138613 TACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGAC 138672
|| ||||| ||| || |||| ||| | ||||||| |||||||||| | |
Sbjct 7150 GGAGCGACCAACAGACTGTTGCGTACACCATTCTGCTTGATCTGTTCCTTGAGGCTGGTC 7091
Query 138673 CAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTT 138732
|| ||||| | |||| || | |||||||| |||||||| | || | |||
Sbjct 7090 CAATCCCAAAGATCGGACGGCGTGACATTCCACATGTCGTACTGAAGAAT-----ACCTT 7036
Query 138733 GCGGGAC-----TGCCTTCGTACGAATCGTA--TACACCAAACTCTTGCGCCAACTCGTT 138785
| | ||| ||| ||||| | ||| ||| | ||| |||| || | ||| |
Sbjct 7035 GGGAGACAGGGGAGCCCTCGTAGGTGGAGTAGGTACCCTCAAC-CTTG-GCAATCTCCAT 6978
Query 138786 GCTCGC-CTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGG 138844
| || || || ||||||| ||| || || ||| ||| |||| || ||| || ||
Sbjct 6977 GGAGGCAGTCAAG-GCACCATGGTAGATGGTCTCGAAAATTTGCTTGTTCAGCTGTCTGG 6919
Query 138845 CCTC-GGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACG 138903
|||| |||| |||| | |||||||| | | ||| | ||| || || || || ||
Sbjct 6918 CCTCAGGCG-ACTCGAAAGGCATGCGCAATGCCAAGAAAGTGTCAGCAAGACCCTGAACA 6860
Query 138904 CCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATA 138959
|| | || | || || || |||| || ||| ||||| || || || ||| ||
Sbjct 6859 CCAAGACCAATGGGACGGTGTCGCA----TGTTGCTGTTGCGAGCCTCCGGGACAGGGTA 6804
Query 138960 ATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCT-TAGTCG-TATGCTTT 139017
||||| |||||||||||| |||| | || || ||||| |||| || || || |
Sbjct 6803 GTAGTTGACATCGATGATTCTGTTCAGGTTACGGACGACAACCTGTA--CGACATCGTGC 6746
Query 139018 AATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACG-ACGTCGACAAATTTGTTGAC 139076
|| | || ||||| ||||| |||| | || ||| | | || || | ||
Sbjct 6745 AACTTCTGGAAGTCGTAGTTGCCCTCGTTATAATCAACGAAAGACGGCAGA----GCGAG 6690
Query 139077 ACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTC 139136
| || || | |||||| || || || || || || | ||| |||| ||| ||
Sbjct 6689 A------GAAGCCAAGTTGCAGACAGCGACCTCATCAGGCGCCGAGTACTCGATAATCTC 6636
Query 139137 GGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACA 139196
| |||| || | || ||||| | || | ||| ||||| || ||||| ||
Sbjct 6635 AGTGCACAGGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTACGGTTGCA 6576
Query 139197 AGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTT 139256
||| ||||||||||| | || | || ||||| || | ||| | |||| |
Sbjct 6575 GTGATCCTTGTAAAGCATGAAGGGGTTTCCGGTTTCGGTCTGGGCCTCAAGAATGGCATA 6516
Query 139257 GAACAAGTCCCTAG-CTTG-TATT-TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTC 139313
||| | | | |||| | || || || || | ||| | ||| ||||||||
Sbjct 6515 CCACAGCTTCTGCGCCTTGATCTTCTGGCGGCCGCGACCTTCAGC---CTCATACTTTTC 6459
Query 139314 GTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGAC 139372
||| | | || || ||| || |||||| | |||| || | | |||| || || |
Sbjct 6458 GTACAAAGCCTCAAACTCG-TCGCCGTAGACATCAGCTAGGCCAGGGCACTCGTTGGGGC 6400
Query 139373 ACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACA 139432
|||| | | ||| |||||||| || ||| ||| ||||||| || || |||||||| |
Sbjct 6399 ACATCAAAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAGA 6340
Query 139433 AAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTT 139490
||| || | | ||| || || || ||| || ||| || | | ||
Sbjct 6339 GAGCCAAGAAAAGATCACGGGCACGGACTTCCTCCTTGCCGTGGTT--CTTGCGAAGGTC 6282
Query 139491 AAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTT 139547
||||| || || || || | |||||| || || || |||||||| | || || | |
Sbjct 6281 GAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACCAGGTCT 6222
Query 139548 CCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTC 139607
| |||||||| || || |||| || ||| |||||||| || || | ||| || |
Sbjct 6221 CTTGTTGCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAAGACACGAAGCATGGGTAC 6162
Query 139608 CAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATG 139667
| ||| ||| || |||||||| | | ||| | | | ||| |||| ||
Sbjct 6161 AATTCCGTTCGAGGTACCGTTGGTTCCAGCGATATAAGAGCCGGTAGCACGGATACGGTG 6102
Query 139668 TACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCT 139726
| |||| || || || || | | ||||| || | | || || | | || |
Sbjct 6101 GATGTTGAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTG-AGGGTAT 6043
Query 139727 CGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCG 139786
|||| ||||| |||||||| |||| ||| ||| || ||||| || || | || |
Sbjct 6042 CGTAGATACCGTCAATGCTGTCATCCTTCATATCGACGAGGAAGCAGGAAGACAACTGTG 5983
Query 139787 GTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGAC 139845
| || ||| ||||| ||| ||||| || || || ||||| | ||| ||||||
Sbjct 5982 CTTGTGGCGTTCCGGCGTTAAAGAGAGTGGGGGAAGCATGGGTGAAGTACTTG-TTCGAC 5924
Query 139846 ATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACT 139905
||||| | ||| |||| || | || ||| ||| || ||||||||| | ||
Sbjct 5923 ATCAAGTTGTAGGTTTGAATAACCTTCTCAACATCGTCACCCCAGATACCGACGGCAACA 5864
Query 139906 CGCATCAGCATATGTTG 139922
||||| | ||| || ||
Sbjct 5863 CGCATGATCATGTGCTG 5847
>seq1
Length=1159409
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || || || || || || || || || |
Sbjct 850344 GATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTC 850285
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || ||||| || ||||| || || || |||||||| ||
Sbjct 850284 CGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 850225
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| || ||||| || || || || ||||| |||||| | | |||| ||||| ||
Sbjct 850224 ACAGCGATTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCGGATTACAA 850165
Query 24883 CATTCAAAAGGA 24894
||| ||||||||
Sbjct 850164 CATCCAAAAGGA 850153
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || |||||||| || || || ||||| || || | |
Sbjct 849826 ATGCAAATCTTCGTCAAGACCCTCACCGGTAAGACGATCACCCTCGAGGTGGAGTCGTCG 849767
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | || |||||||||||| || || || || || || ||
Sbjct 849766 GACACCATCGACAACGTTAAGTCGAA-GATCCAAGACAAGGAGGGTATCCCGCCTGACCA 849708
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTAT 24880
||| || | |||||||| || || ||||||||||| || | | ||| || ||
Sbjct 849707 ACAGCGACTTATCTTTGCGGGTAAGCAGCTGGAGGA--CGGCCGAACTCTCAGCGACTAC 849650
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||| ||||| || || || ||| | || | ||| | || || ||
Sbjct 849649 AACATTCAGAAGGAGTCTACCCTCCACCTTGTTCTTCGACTTCGTGGTGG 849600
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || || || || || || | ||||| ||| | |
Sbjct 849598 ATGCAGATCTTCGTCAAGACCTTGACGGGCAAGACGATCACATTGGAAGTTGAATCTTCG 849539
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || ||||| || || |||||
Sbjct 849538 GATACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCTGATCAG 849479
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | ||||| || || || || |||||||| | | | || || || |||
Sbjct 849478 CAACGTCTTATCTTCGCTGGTAAGCAATTGGAGGATGGTCGCACCCTGAGCGACTACAAC 849419
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || ||||||||
Sbjct 849418 ATCCAGAAGGAGTCCACGCTCCACTTGGT 849390
>seq39
Length=338136
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || ||||| || || || || || | ||
Sbjct 215091 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 215032
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || ||||| ||
Sbjct 215031 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 214972
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| ||||| || ||||| |||||| ||| | | || || || |||
Sbjct 214971 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAAC 214912
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
|| || ||||| || || ||| | || | || |||| || ||||
Sbjct 214911 ATCCAGAAGGAGAGCACCCTCCACCTCGTCCTCCGTCTGCGTGGTGGCG 214863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449892544275720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |