Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq21 176 4e-39 seq1 98.7 9e-16 seq39 93.3 4e-14 >seq21 Length=436828 Score = 176 bits (194), Expect = 4e-39 Identities = 968/1517 (64%), Gaps = 60/1517 (4%) Strand=Plus/Minus Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATC 138492 |||||||| || || ||||| ||||| | ||| || | || | ||| || | Sbjct 7330 GCAATGATACGGTTCTTCATGCCATCGGACCAGAGACCCATATCGACAAGGTCCTTAAGA 7271 Query 138493 AGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTG 138552 || | ||| | |||||| || ||||| || | || |||||| ||| ||||| Sbjct 7270 AGCCAAGGGTTAACGACCTGGAACTCACCAGCAAGCACACGACGAGAGTAGATGTTCGAA 7211 Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612 ||| ||||||| || | |||||||| ||||||||||| | ||| | || || ||||| Sbjct 7210 GTGTAAGGCTCGAAACACTCGTTGTTACCCAGAATCTGGGATGTGCTGGCAGTGGGCATA 7151 Query 138613 TACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGAC 138672 || ||||| ||| || |||| ||| | ||||||| |||||||||| | | Sbjct 7150 GGAGCGACCAACAGACTGTTGCGTACACCATTCTGCTTGATCTGTTCCTTGAGGCTGGTC 7091 Query 138673 CAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTT 138732 || ||||| | |||| || | |||||||| |||||||| | || | ||| Sbjct 7090 CAATCCCAAAGATCGGACGGCGTGACATTCCACATGTCGTACTGAAGAAT-----ACCTT 7036 Query 138733 GCGGGAC-----TGCCTTCGTACGAATCGTA--TACACCAAACTCTTGCGCCAACTCGTT 138785 | | ||| ||| ||||| | ||| ||| | ||| |||| || | ||| | Sbjct 7035 GGGAGACAGGGGAGCCCTCGTAGGTGGAGTAGGTACCCTCAAC-CTTG-GCAATCTCCAT 6978 Query 138786 GCTCGC-CTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGG 138844 | || || || ||||||| ||| || || ||| ||| |||| || ||| || || Sbjct 6977 GGAGGCAGTCAAG-GCACCATGGTAGATGGTCTCGAAAATTTGCTTGTTCAGCTGTCTGG 6919 Query 138845 CCTC-GGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACG 138903 |||| |||| |||| | |||||||| | | ||| | ||| || || || || || Sbjct 6918 CCTCAGGCG-ACTCGAAAGGCATGCGCAATGCCAAGAAAGTGTCAGCAAGACCCTGAACA 6860 Query 138904 CCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATA 138959 || | || | || || || |||| || ||| ||||| || || || ||| || Sbjct 6859 CCAAGACCAATGGGACGGTGTCGCA----TGTTGCTGTTGCGAGCCTCCGGGACAGGGTA 6804 Query 138960 ATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCT-TAGTCG-TATGCTTT 139017 ||||| |||||||||||| |||| | || || ||||| |||| || || || | Sbjct 6803 GTAGTTGACATCGATGATTCTGTTCAGGTTACGGACGACAACCTGTA--CGACATCGTGC 6746 Query 139018 AATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACG-ACGTCGACAAATTTGTTGAC 139076 || | || ||||| ||||| |||| | || ||| | | || || | || Sbjct 6745 AACTTCTGGAAGTCGTAGTTGCCCTCGTTATAATCAACGAAAGACGGCAGA----GCGAG 6690 Query 139077 ACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTC 139136 | || || | |||||| || || || || || || | ||| |||| ||| || Sbjct 6689 A------GAAGCCAAGTTGCAGACAGCGACCTCATCAGGCGCCGAGTACTCGATAATCTC 6636 Query 139137 GGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACA 139196 | |||| || | || ||||| | || | ||| ||||| || ||||| || Sbjct 6635 AGTGCACAGGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTACGGTTGCA 6576 Query 139197 AGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTT 139256 ||| ||||||||||| | || | || ||||| || | ||| | |||| | Sbjct 6575 GTGATCCTTGTAAAGCATGAAGGGGTTTCCGGTTTCGGTCTGGGCCTCAAGAATGGCATA 6516 Query 139257 GAACAAGTCCCTAG-CTTG-TATT-TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTC 139313 ||| | | | |||| | || || || || | ||| | ||| |||||||| Sbjct 6515 CCACAGCTTCTGCGCCTTGATCTTCTGGCGGCCGCGACCTTCAGC---CTCATACTTTTC 6459 Query 139314 GTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGAC 139372 ||| | | || || ||| || |||||| | |||| || | | |||| || || | Sbjct 6458 GTACAAAGCCTCAAACTCG-TCGCCGTAGACATCAGCTAGGCCAGGGCACTCGTTGGGGC 6400 Query 139373 ACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACA 139432 |||| | | ||| |||||||| || ||| ||| ||||||| || || |||||||| | Sbjct 6399 ACATCAAAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAGA 6340 Query 139433 AAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTT 139490 ||| || | | ||| || || || ||| || ||| || | | || Sbjct 6339 GAGCCAAGAAAAGATCACGGGCACGGACTTCCTCCTTGCCGTGGTT--CTTGCGAAGGTC 6282 Query 139491 AAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTT 139547 ||||| || || || || | |||||| || || || |||||||| | || || | | Sbjct 6281 GAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACCAGGTCT 6222 Query 139548 CCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTC 139607 | |||||||| || || |||| || ||| |||||||| || || | ||| || | Sbjct 6221 CTTGTTGCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAAGACACGAAGCATGGGTAC 6162 Query 139608 CAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATG 139667 | ||| ||| || |||||||| | | ||| | | | ||| |||| || Sbjct 6161 AATTCCGTTCGAGGTACCGTTGGTTCCAGCGATATAAGAGCCGGTAGCACGGATACGGTG 6102 Query 139668 TACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCT 139726 | |||| || || || || | | ||||| || | | || || | | || | Sbjct 6101 GATGTTGAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTG-AGGGTAT 6043 Query 139727 CGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCG 139786 |||| ||||| |||||||| |||| ||| ||| || ||||| || || | || | Sbjct 6042 CGTAGATACCGTCAATGCTGTCATCCTTCATATCGACGAGGAAGCAGGAAGACAACTGTG 5983 Query 139787 GTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGAC 139845 | || ||| ||||| ||| ||||| || || || ||||| | ||| |||||| Sbjct 5982 CTTGTGGCGTTCCGGCGTTAAAGAGAGTGGGGGAAGCATGGGTGAAGTACTTG-TTCGAC 5924 Query 139846 ATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACT 139905 ||||| | ||| |||| || | || ||| ||| || ||||||||| | || Sbjct 5923 ATCAAGTTGTAGGTTTGAATAACCTTCTCAACATCGTCACCCCAGATACCGACGGCAACA 5864 Query 139906 CGCATCAGCATATGTTG 139922 ||||| | ||| || || Sbjct 5863 CGCATGATCATGTGCTG 5847 >seq1 Length=1159409 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || || || || || || | Sbjct 850344 GATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTC 850285 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||| || ||||| || || || |||||||| || Sbjct 850284 CGACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 850225 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||| || || || || ||||| |||||| | | |||| ||||| || Sbjct 850224 ACAGCGATTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCGGATTACAA 850165 Query 24883 CATTCAAAAGGA 24894 ||| |||||||| Sbjct 850164 CATCCAAAAGGA 850153 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || |||||||| || || || ||||| || || | | Sbjct 849826 ATGCAAATCTTCGTCAAGACCCTCACCGGTAAGACGATCACCCTCGAGGTGGAGTCGTCG 849767 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || |||||||||||| || || || || || || || Sbjct 849766 GACACCATCGACAACGTTAAGTCGAA-GATCCAAGACAAGGAGGGTATCCCGCCTGACCA 849708 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTAT 24880 ||| || | |||||||| || || ||||||||||| || | | ||| || || Sbjct 849707 ACAGCGACTTATCTTTGCGGGTAAGCAGCTGGAGGA--CGGCCGAACTCTCAGCGACTAC 849650 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| || || || ||| | || | ||| | || || || Sbjct 849649 AACATTCAGAAGGAGTCTACCCTCCACCTTGTTCTTCGACTTCGTGGTGG 849600 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || | ||||| ||| | | Sbjct 849598 ATGCAGATCTTCGTCAAGACCTTGACGGGCAAGACGATCACATTGGAAGTTGAATCTTCG 849539 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 849538 GATACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCTGATCAG 849479 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || || |||||||| | | | || || || ||| Sbjct 849478 CAACGTCTTATCTTCGCTGGTAAGCAATTGGAGGATGGTCGCACCCTGAGCGACTACAAC 849419 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || |||||||| Sbjct 849418 ATCCAGAAGGAGTCCACGCTCCACTTGGT 849390 >seq39 Length=338136 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | || Sbjct 215091 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 215032 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 215031 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 214972 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| ||||| || ||||| |||||| ||| | | || || || ||| Sbjct 214971 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAAC 214912 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || || ||||| || || ||| | || | || |||| || |||| Sbjct 214911 ATCCAGAAGGAGAGCACCCTCCACCTCGTCCTCCGTCTGCGTGGTGGCG 214863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892544275720