Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11]
899 sequences; 37,704,138 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 9e-26
>seq1
Length=1159409
Score = 132 bits (146), Expect = 9e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| || || || || ||||| || || || || || | | |||
Sbjct 849383 ACGGAGGACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACC 849442
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || | ||| || ||||| ||||| || | ||| ||||| || || ||||| |||||
Sbjct 849443 ATCCTCCAATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGTGGGATTCCCTCCTT 849502
Query 82715 ATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
|| || ||||| ||| || || || || |||||||| || ||| |||||||| || |
Sbjct 849503 GTCCTGGATCTT-GCTCTTGACGTTGTCGATCGTATCCGAAGATTCAACTTCCAATGTGA 849561
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||||| ||||| ||||| || || ||||||||
Sbjct 849562 TCGTCTTGCCCGTCAAGGTCTTGACGAAGATCTGCAT 849598
Score = 107 bits (118), Expect = 4e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | ||| ||||||||||| ||||| || || || || |
Sbjct 849826 TACCACCACGGAGACGAAGGACAAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGG 849885
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|||| ||| ||||| || ||||| || || || ||||| || | ||||| || || |
Sbjct 849886 ATAGGGTTCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGG 849945
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || |||||||||| || ||||| || || || || | || |
Sbjct 849946 GAATGCCTTCCTTGTCCTGAATCTTTGACTTGACATTGTCGATTGTGTCGGACGACTCGA 850005
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798
| || | || || ||||| || || | ||||| ||
Sbjct 850006 CCTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGAC 850042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981815890884761
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |