Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 1e-13 seq83 84.2 5e-11 >seq1 Length=1159409 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || |||||||| |||||||| ||| ||| || Sbjct 849595 CAGATCTTCGTCAAGACCTTGACGGGCAAGACGATCACATTGGAAGTTGAATCTTCGGAT 849536 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || ||||| || || ||| Sbjct 849535 ACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCTGATCAGCAA 849476 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || ||||| ||||| ||||| | || || ||| |||||| || Sbjct 849475 CGTCTTATCTTCGCTGGTAAGCAATTGGAGGATGGTCGCACCCTGAGCGACTACAACATC 849416 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| || || ||| Sbjct 849415 CAGAAGGAGTCCACGCTCCAC 849395 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| ||||| || || || | || || || || |||||| |||| Sbjct 850040 CAAGACCCTCACCGGAAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACAATCGACAA 849981 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||| || || ||||| ||| || ||| || | || ||||| Sbjct 849980 TGTCAAGTCAAAGATTCAGGACAAGGAAGGCATTCCCCCCGACCAACAGCGTCTGATCTT 849921 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| ||||| | || || || | || | |||| |||||| | ||||| || || Sbjct 849920 CGCCGGCAAGCAACTTGAGGACGGCCGAACCCTATCCGACTACAACATTCAGAAGGAATC 849861 Query 206364 TACTCTTCACCTTGT 206378 |||||| |||||||| Sbjct 849860 TACTCTCCACCTTGT 849846 >seq83 Length=135873 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| | || ||||| ||| ||||| |||| Sbjct 25504 AAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAAT 25563 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || |||||| |||||| || | || |||||| Sbjct 25564 GTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAACAGCGTCTGATCTTC 25623 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| | || || || | || | | || |||||| ||||||| ||||| Sbjct 25624 GCCGGCAAGCAACTCGAGGACGGCCGAACGCTCTCTGACTACAACATCCAGAAGGAGTCC 25683 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 25684 ACTCTCCACCTGGT 25697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181807187270979