Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 5e-13 >seq3 Length=1020397 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 47057 CATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACA 47116 ||| || |||||||| || |||| ||| ||||| |||| | || ||||||||| | | Sbjct 108698 CATTGAGAAGGAGTTCTTGACTGAGGCTTTGCCCTGCGCCCTTCTCGGCATGAACTCCAA 108757 Query 47117 GTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACC 47176 | ||| | || || ||||| || || || ||||||||||| || || ||| | Sbjct 108758 CTTGATGAAGCAGTACATCGAGTTCGTCGCTGACCGTCTGTTGGTCGCCCTTGG-CAA-C 108815 Query 47177 GAAATATTTTAATGCTC--GTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGC 47234 || | | || | || | || || || || || ||| | ||||| || |||| ||| Sbjct 108816 GAGAAGGTCTACCGTTCCAGCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGC 108875 Query 47235 AAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 || ||||| || |||||||| |||||||| || || Sbjct 108876 AAGACCAACTTCTTCGAGAAGCGAGTCGGTGACTA 108910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605844081640