Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq25 120 2e-22 >seq25 Length=410318 Score = 120 bits (132), Expect = 2e-22 Identities = 305/459 (66%), Gaps = 10/459 (2%) Strand=Plus/Minus Query 19352 TTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAAT 19411 ||||||| || || |||||||| || ||||| || || || ||| | || |||| Sbjct 328563 TTTTGCTATACGGACCACCGGGAACGGGCAAAACGTTGATCGCCAGACAGATTGGTAAGA 328504 Query 19412 TACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAG 19471 | | | | | ||||| || | || ||||| ||||| | ||||||||||| | Sbjct 328503 TGTTGAATGCTCGAGAGCCCAAGATCATCAACGGTCCGGAAATTCTTAATAAATATGTGG 328444 Query 19472 GTCAATCGGAAGAAAATGT-ACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGT 19530 |||||||||| || || || | || | ||||||| || || | ||||| | | || | Sbjct 328443 GTCAATCGGAGGAGAACGTCAGGAAG-ATGTTTGCAGATGCAG-AGAAGGAGTATAAGGA 328386 Query 19531 TTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAA 19589 |||| | | ||| |||||||| || || | ||||||||||| || | || || Sbjct 328385 GAAGGGTGAGGAGAGTGGCTTGCACATCATCATTTTCGATGAATTGGATGCCGTATGCAA 328326 Query 19590 GCAAAGAGGT------TCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCT 19643 ||| |||||| || |||| | || || |||| || ||||| ||||| || Sbjct 328325 GCAGAGAGGTAGCGGATCGGGTGGCACCGGTGTTGGCGACAGCGTGGTCAACCAACTTCT 328266 Query 19644 GTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAG 19703 ||| ||| | || ||||| | ||||| || || || ||| ||||||| ||||| || | Sbjct 328265 GTCTAAACTTGATGGTGTGGATCAACTCAACAACATCTTACTTATTGGAATGACCAACCG 328206 Query 19704 ACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAAT 19763 ||| | || ||| || | | ||||| ||||| | || || | | || || Sbjct 328205 GAAGGATATGATTGACGATGCGCTGCTTCGACCTGGTCGTCTCGAGGTACATGTTGAGAT 328146 Query 19764 TAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAA 19802 | ||||| |||||| || || ||| |||| || || Sbjct 328145 TTCGTTACCTGATGAACACGGCCGAGTGCAAATCTTGAA 328107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397451645248495