Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq21 168 8e-37 seq3 86.0 8e-12 >seq21 Length=436828 Score = 168 bits (186), Expect = 8e-37 Identities = 889/1396 (64%), Gaps = 35/1396 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | ||||| || || || || || || ||||||| || || | ||| Sbjct 7223 GTAGATGTTCGAAGTGTAAGGCTCGAAACACTCGTTGTTACCCAGAATCTGGGATGTGCT 7164 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||| || ||||| || || | ||| |||||||| || | ||| |||| |||||| |||| Sbjct 7163 GGCAGTGGGCATAGGAGCGACCAACAGACTGTTGCGTACACCATTCTGCTTGATCTGTTC 7104 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATGTCAAACTGA 110884 |||||| ||| || | || | || | || |||| ||||||| ||||| Sbjct 7103 CTTGAGGCTGGTCCAATCCCAAA-GATCGGACGGCGTGACATTCC-ACATGTCGTACTGA 7046 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944 || | |||||||| | || || ||||| |||| |||| ||| | | | || Sbjct 7045 AGAATACCTTGGGAGACAGGGGAGCCCTCGTAGGTGGAGTAGGTACCCTCAACCTTGGCA 6986 Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004 | || | || || || | || || ||||| || || || | |||| | Sbjct 6985 ATCTCCATGGAGGCAGTCAAGGCACCATGGTAGATGGTCTCGAAAATTTGCTTGTTCAGC 6926 Query 111005 TCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCA--CAAAATAAATACATCCGCGAGA 111061 | |||| ||| || || ||| || | ||| | | || || | || || ||| Sbjct 6925 TGTCTGGCCTCAGGCGACTCGAAAGGCAT-GCGCAATGCCAAGAAAGTG--TCAGCAAGA 6869 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA--- 111118 || |||||||| | |||||| || | ||||||||| || || | ||| || ||| Sbjct 6868 CCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTG--CTGTTGCG-AGCCTCCGGG 6812 Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178 || || || | || || |||| || ||| || || | |||| || | || Sbjct 6811 ACAGGGTAGTAGTTGACATCGATGATTCTGTTCAGGTTACGGACGACAACCTGTACGACA 6752 Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGCGAG---TCTCTTCATTGACATACTTTGGAAGG 111235 || || | || | | || | ||| | | ||| || | || || || Sbjct 6751 TCGTGCAACTTCTGGAAGTCGTAGTTGCCCTCGTTATAATCAACGAAAGAC---GGCAGA 6695 Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 |||| || ||||| ||||| ||||| |||||| | | |||||| | ||| || Sbjct 6694 GCGAGAGAAGCCAAGTTGCAGACAGCGACCTCATCAGGCGCCGAGTACTCGATAATCTCA 6635 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 || || | |||||| || ||| || || | ||||||||||| ||||| |||||| Sbjct 6634 GTGCACAGGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTACGGTTGCAG 6575 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 ||||||||| |||||| |||| | || || || ||||| | | ||||| || | | Sbjct 6574 TGATCCTTGTAAAGCATGAAGGGGTTTCCGGTTTCGGTCTGGGCCTCAAGAATGGCATAC 6515 Query 111416 CA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 111473 || | | || ||| | || | ||||| | | || || || ||||| |||||| || Sbjct 6514 CACAGCTTCTGCGCCTTGATCTTCTGGCG--GCCGCGACCTTCAGCCTCATACTTTTCGT 6457 Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 111533 | | || |||||||| || || | || | || || || || || || || | Sbjct 6456 ACAAAGCCTCAAACTCGTCGCCGTAGACATCAGCTAGGCCAGGGCACTCGTTGGGGCACA 6397 Query 111534 AAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593 | || ||| | || | ||| || ||||||||||||||||| |||||||| || | Sbjct 6396 TCAAAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAGAGAG 6337 Query 111594 ATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 | || ||||| | ||| || | || || | || ||||| || | || ||| Sbjct 6336 CCAAGAAAAGATCACGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGG 6278 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCG 111708 ||||| | || ||||| |||||| |||||||| |||| |||| | || || | | Sbjct 6277 AACTCGAAGACATCCGAGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACCAGGTCTCTTG 6218 Query 111709 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768 | ||| | || | || || | || ||| || || || |||||||| || | ||| Sbjct 6217 TTG-CCACCCTGGTCAACGTATCTAGCAGTGTTATTGAAGACACGAAGCATGGGTACAAT 6159 Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828 || | || ||| || || || ||| ||| | || | | | ||||| Sbjct 6158 TCCGTTCGAGGTACCGTTGGTTCCAGCGATATAAGAGCCGGTAGCACGGATACGGTGGAT 6099 Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888 || | |||||||| |||||| ||| ||||| ||||| | | || || | || Sbjct 6098 GTTGAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTA 6039 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 |||||||| || ||| ||||| | ||| |||||||| |||| ||| | | Sbjct 6038 GATACCGTCAATGCTGTCATCCTTCATATCGACGAGGAAGCAGGAAGACAACTGTGCTTG 5979 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCT 112007 ||| || || || || ||||| || || | || || |||| ||| | | |||||| Sbjct 5978 TGGCGTTCCGGCGTTAAAGAGAGTGGGGGAAGCATGGGTGAA-GTACTTGTTCGACATCA 5920 Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067 || ||| || | | || |||| || || || ||| |||| || || |||| Sbjct 5919 AGTTGTAGGTTTGAATAACCTTCTCAACATCGTCACCCCAGATACCGACGGCAACACGCA 5860 Query 112068 TGAACATGTACTGTGG 112083 ||| ||||| ||| || Sbjct 5859 TGATCATGTGCTGCGG 5844 >seq3 Length=1020397 Score = 86.0 bits (94), Expect = 8e-12 Identities = 333/514 (65%), Gaps = 17/514 (3%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || || || || || || |||||| ||||| ||||| ||||| Sbjct 108611 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACC 108552 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||||||| | |||| | || | || ||||||||||||||| || Sbjct 108551 ACGCTTCTTCAACCAGAAGATAGAGGCAAAGGCACCACTGAAGAAGATACCCTCAACGGC 108492 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACT--TTG-CATCAAACCATTTCAT 122846 || || |||| || || | || |||| ||||| ||| || | | ||||| | Sbjct 108491 AGCGAAGGCAATGAGTCGCTGAGCAAAGG---TAGACTTCTTGTCAGCGATCCATTGGAG 108435 Query 122847 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTT 122906 ||||| | ||||| || || || | || | ||||| | || | || | Sbjct 108434 AGCCCAGTCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAAGAGATGGGT 108375 Query 122907 CTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAAC 122966 ||| | | ||||| ||||| | ||||| | || || || ||| || | Sbjct 108374 CTTCTGGGCGGGCTCCTTGATGTAGGTATCAATGAGAAGAGAGTACGTCTCGGAGTGGAT 108315 Query 122967 CAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCAT 123025 | | ||| ||| | || | ||||||| | || || ||| |||||||| ||| Sbjct 108314 GTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGGGATCTGAACTTCA- 108257 Query 123026 CCGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATG 123082 |||| ||| | | || | ||||| || || || |||||| | || ||||| | Sbjct 108256 CCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGG 108199 Query 123083 CCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAA 123139 | ||||||| | ||| ||| || | || |||| || | ||||||| | || Sbjct 108198 CAAGGATGTGGGAGACGAAAAACTTCTCGTCATCGTTCAATCGGTTACTCCAGTCATGAA 108139 Query 123140 GATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 |||| ||||| | ||||| || || |||||||| Sbjct 108138 GATCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 108105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024942490400