Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq21 192 7e-44 seq3 163 4e-35 >seq21 Length=436828 Score = 192 bits (212), Expect = 7e-44 Identities = 1156/1821 (63%), Gaps = 65/1821 (4%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| || |||||||| || |||||||| || | ||||| || Sbjct 7567 CGTAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGTGAAGTGCATGCTGGTG 7508 Query 117897 AACTTGGAGAGGGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 | |||| | ||| || || || |||| | ||||| ||||||||||| ||||| Sbjct 7507 ATCTTGCCCATGGTGGG-CTCTCTCATGTGAATGTTCAGTGACTGGGATTGATCAATGAA 7449 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCT 118015 || || || || ||||| | || || ||| ||||||||| || ||| | Sbjct 7448 CGCACCACGGTCAGCAGCCATCTGAACAACTGTTTTCTGGGAGATTTCCCAAACCGTCTT 7389 Query 118016 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTT 118075 |||||| ||| || || || || | || || || | || || ||||| Sbjct 7388 GTAGAGCGCCTTGATGTCGGTAGGAATGTTAGGAATGTTCTGAACAGAACC----GCCTT 7333 Query 118076 -GACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 118131 | | |||| | | |||||| | | ||||||||||| || | || |||| | Sbjct 7332 CGGCAATGATACGGTTCTTCATGCCATCGGACCAGAGACCCATATCGACAAGGTCCTTAA 7273 Query 118132 CGAG---ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATA 118187 || | | ||| || || |||||||| || || || | ||| ||||| Sbjct 7272 GAAGCCAAGGGTTA---ACGACCTGGAACTCACCAGCAAGCACACGACG-AGAGTAGATG 7217 Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247 || | ||||| ||||| || ||||| |||||||||| || |||| |||| ||| ||| Sbjct 7216 TTCGAAGTGTAAGGCTCGAAACACTCGTTGTTACCCAGAATCTGGGATGTGCTGGCAGTG 7157 Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGA 118307 ||||| || || | | || ||||| || | ||| || | | | || |||||||||| Sbjct 7156 GGCATAGGAGCGACCAACAGACTGTTGCGTACACCATTCTGCTTGATCTGTTCCTTGAGG 7097 Query 118308 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGGAGGATA 118364 | ||| || | || | | | | | | |||||| || |||| || ||| Sbjct 7096 CTGGTCCAATCCCAA---AGATCGGACGGCGTGACATTCCACATGTCGTACTGAAGAATA 7040 Query 118365 CCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC- 118423 |||||||| | || || ||||| | || || | |||||||||| || | || Sbjct 7039 CCTTGGGAGACAGGGGAGCCCTCGTAGGTGGAGTAGGTACCCTCAACCTTGGCAATCTCC 6980 Query 118424 --GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGC 118480 |||| | | | ||| | || || || || || ||||| | |||| || Sbjct 6979 ATGGAGGCAGTC---AAGGCACCATGGTAGATGGTCTCGAAAATTTGCTTGTTCAGCTGT 6923 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA--CAAAATAAATACATCCGCGAGACCT 118538 || |||||| || || || | | || | | || || | || || ||||| Sbjct 6922 CT-GGCCTCAGGCGACTCGAAAGGCATGCGCAATGCCAAGAAAGTG--TCAGCAAGACCC 6866 Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACG 118595 || ||||| || ||||| || || |||| ||| || || ||||| |||| || Sbjct 6865 TGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTGCGAGC---CTCCGGGACA 6809 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 || || | || |||||| | || || || || | |||||||| | || || Sbjct 6808 GGGTAGTAGTTGACATCGATGATTCTGTTCAGGTTACGGACGACAACCTGTACGACATCG 6749 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAG---TCTCTTCATTGACATACTTAGGAAGGGCG 118712 || | ||| | | | || | ||| | | ||| || | || || || ||| Sbjct 6748 TGCAACTTCTGGAAGTCGTAGTTGCCCTCGTTATAATCAACGAAAGAC---GGCAGAGCG 6692 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 | || |||| || || |||| | |||||| | | |||||| ||||| || ||| Sbjct 6691 AGAGAAGCCAAGTTGCAGACAGCGACCTCATCAGGCGCCGAGTACTCGATAATCTCAGTG 6632 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 |||| ||| || || ||| || || | ||||||||| || ||| ||| || | Sbjct 6631 CACAGGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTACGGTTGCAGTGA 6572 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 ||||||||||||||| | || | || || || || |||| || ||||| || | ||| Sbjct 6571 TCCTTGTAAAGCATGAAGGGGTTTCCGGTTTCGGTCTGGGCCTCAAGAATGGCATACCAC 6512 Query 118893 A-CATCGGCAGCTGGCAC-AGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGA 118950 | | || || || | | ||||| | | || || || |||| |||||| ||| | Sbjct 6511 AGCTTCTGCGCCTTGATCTTCTGGCG--GCCGCGACCTTCAGCCTCATACTTTTCGTACA 6454 Query 118951 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 119010 || |||||||| || || | | || | || || || || | ||||| | | Sbjct 6453 AAGCCTCAAACTCGTCGCCGTAGACATCAGCTAGGCCAGGGCACTCGTTGGGGCACATCA 6394 Query 119011 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 119070 || ||| | || || ||| || ||||||||||| ||||| || |||||||| ||| Sbjct 6393 AAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAGAGAGCCA 6334 Query 119071 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 119130 |||| ||||| || || |||| || | || || || || | || | || | Sbjct 6333 AGAAAAGATCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACT 6274 Query 119131 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGA 119186 | | || ||||| |||||| || || ||||| | |||| | ||| || | | Sbjct 6273 CGAAGACATCCGAGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACCAGGTCTCTTGTTG- 6215 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| |||||| || || || |||||| || || ||||||||||| || | || || Sbjct 6214 CCACCCTGGTCAACGTATCTAGCAGTGTTATTGAAGACACGAAGCATGGGTACAATTCCG 6155 Query 119247 TCGGATTGGCCATTTG-TCCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGT 119304 | || || || | ||| ||| ||| ||| | | || | || | |||||||| Sbjct 6154 TTCGAGGTACCGTTGGTTCCAGCGATATAAGAGCC--GGTAGCACGGATACGGTGGATGT 6097 Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364 | ||||||||| || ||| ||| ||||| || || | |||| | |||||| Sbjct 6096 TGAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAGA 6037 Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG- 119423 | || || || |||| |||| | ||| |||||||||| |||| || || || Sbjct 6036 TACCGTCAATGCTGTCATCCTTCATATCGACGAGGAAGCAGGAAGACAACTG-TGCTTGT 5978 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 119482 || || || ||||| |||||||| || | || ||| |||| ||| | | |||||| Sbjct 5977 GGCGTTCCGGCGTTAAAGAGAGTGGGGGAAGCATGGGTGAA-GTACTTGTTCGACATCAA 5919 Query 119483 GTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 || |||||| | | || || || || || ||||||| | || ||||| Sbjct 5918 GTTGTAGGTTTGAATAACCTTCTCAACATCGTCACCCCAGATACCGACGGCAACACGCAT 5859 Query 119543 AAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTC 119602 | ||||| || ||| | || | | | |||| ||| | | | |||| ||| Sbjct 5858 GATCATGTGCTGCGGTCTCTCTACAATCTTCTCATCAAGCTTGAGCAAGTAAGATCGCTC 5799 Query 119603 CAAGGTCTTGAGACCAAAATA 119623 ||||||||||| |||||| || Sbjct 5798 CAAGGTCTTGAAACCAAAGTA 5778 >seq3 Length=1020397 Score = 163 bits (180), Expect = 4e-35 Identities = 533/815 (65%), Gaps = 21/815 (3%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 108910 TAGTCACCGACTCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 108851 Query 129788 AAATCAAATGGGTTCTTTGA--GTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || || ||||| | || | | | || || | |||| | |||| Sbjct 108850 AAGTCGAAGGGGTTGCTGGAACGGTAGACCTT-CTCGTTG-CCAAGGGCGACCAACAGAC 108793 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | |||| |||| ||||||| |||| | ||||||||| |||| ||| | Sbjct 108792 GGTCAGCGACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGAAGGGCGC 108733 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | || | || || | |||| ||||||||||| | || || || | ||| | Sbjct 108732 AGGGCAAAGCCTCAGTCAAGAACTCCTTCTCAATGACAACGGCATCGGTGATGATCTTCT 108673 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 |||| ||| |||| || | || || ||| || ||| || || Sbjct 108672 CAATGAGGTCCTTGCCTGGGCGGTTCTTCAGGTGAGAGAACAGCAGGCAGGCGAAGTCAG 108613 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 |||||||||||||||||| |||||||| || || |||||| ||||| ||||| |||| Sbjct 108612 TGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGAC 108553 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | ||||||||||||||||| || | ||| | ||| ||||||||| ||||| || Sbjct 108552 CACGCTTCTTCAACCAGAAGATAGAGGCAAAGGCACCACTGAAGAAGATACCCTCAACGG 108493 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGT-ATCAAACCACTTCA 130202 ||||| |||| ||| |||| |||||||| |||| |||| | | | ||| | | Sbjct 108492 CAGCGAAGGCAATGAGTCGCTGAGCAAAGG---TAGACTTCTTGTCAGCGATCCATTGGA 108436 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 ||||| | ||||| ||| || |||| ||| | || || | ||||| | Sbjct 108435 GAGCCCAGTCAGCCTTACGGCGGATGCAGGGGATGGTGTCAATGGCGTTGAAGAGATGGG 108376 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 |||| | | || || |||||||| |||| ||||| || || || ||| |||| Sbjct 108375 TCTTCTGGGCGGGCTCCTTGATGTAGGTATCAATGAGAAGAGAGTACGTCTCGGAGTGGA 108316 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | ||||||| | || || ||| ||||| || ||| Sbjct 108315 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGAACTTCA 108257 Query 130382 TCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438 | || ||| | | || | ||||| || || || |||||| | || || || Sbjct 108256 -CCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAG 108200 Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495 || ||||| | | ||| || || | ||||||| || | ||||||| | | Sbjct 108199 GCAAGGATGTGGGAGACGAAAAACTTCTCGTCATCGTTCAATCGGTTACTCCAGTCATGA 108140 Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| |||||||| | |||||| |||||||| Sbjct 108139 AGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 108105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618428250334440