Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq21 235 6e-57 seq3 138 1e-27 >seq21 Length=436828 Score = 235 bits (260), Expect = 6e-57 Identities = 1153/1795 (64%), Gaps = 55/1795 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || ||| ||||||| || || || |||| || Sbjct 5844 CCGCAGCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGTGACGATGTTGAGAAGGTT 5903 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | | || ||| || |||||| | | ||| |||| || || | || || ||||| Sbjct 5904 ATTCAAACCTACAACTTGATGTCGAACAAGTAC-TTCACCCATGCTTCCCCCACTCTCTT 5962 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || || || || ||| | | || |||| |||||||| ||| | ||||| || Sbjct 5963 TAACGCCGGAACGCCACAAGCACAGTTGTCTTCCTGCTTCCTCGTCGATATGAAGGATGA 6022 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || |||||||||| | || || | | ||||| ||||| ||| |||||| Sbjct 6023 CAGCATTGACGGTATCTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 6082 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | ||||||| | | | || | ||| ||| || || || Sbjct 6083 TGGTATTGGTCTCAACATCCACCGTATCCGTGCTACCGGCTCTTATATCGCTGGAACCAA 6142 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | || ||| | || |||||||| || || || ||| || | || || Sbjct 6143 CGGTACCTCGAACGGAATTGTACCCATGCTTCGTGTCTTCAATAACACTGCTAGATACGT 6202 Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 | || | ||| | | | || || | |||| |||| |||||||| |||||| Sbjct 6203 TGACCAGGGTGG-CAACAAGAGACCTGGTGCCTTCGCCATCTACCTTGAGCCTTGGCACT 6261 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC 104696 ||||| || | |||||||| || | || ||||| || | ||||| | || || Sbjct 6262 CGGATGTCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGTGCCC 6321 Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756 | ||||| |||| |||||||||||||| || || ||||||||| | || ||| ||| | Sbjct 6322 GTGATCTTTTCTTGGCTCTCTGGATTCCCGACCTTTTCATGAAGCGTGTCGAGAAGAACG 6381 Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 || | ||| || | | || || || || ||||| || | |||| | || || | Sbjct 6382 GCGAGTGGACTTTGATGTGCCCCAACGAGTGCCCTGGCCTAGCTGATGTCTACGGCGACG 6441 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTGCC 104874 ||||||| || | ||| |||||| |||| ||||||| ||| | || || | | | Sbjct 6442 AGTTTGAGGCTTTGTACGAAAAGTATGAGGCTGAAGGTC--GCGGCCGCCAGAAGAT-CA 6498 Query 104875 AGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACA 104933 || || || | ||||| | || ||||| || | || ||||| || || | || | || Sbjct 6499 AGGCGCAGAAGCTGTGGTATGCCATTCTTGAGGCCCAGACCGAAACCGGAAACCCCTTCA 6558 Query 104934 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 104993 |||||||||| || ||| |||| ||||| || |||||||| | ||| || | Sbjct 6559 TGCTTTACAAGGATCACTGCAACCGTAAGAGCAACCAAAAGAACCTTGGTACTATTCGCA 6618 Query 104994 GTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 105053 | ||||| || || || || || | || | | | |||||| ||||| || | Sbjct 6619 GCTCCAACCTGTGCACTGAGATTATCGAGTACTCGGCGCCTGATGAGGTCGCTGTCTGCA 6678 Query 105054 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGATTA 105111 || | || || ||||||| || | || ||| | | || | | || | || | Sbjct 6679 ACTTGGCTTCTCTCGCTCTGCCGTCTTTCGTTGAT-TATA-ACGAGGGCAACTACGACTT 6736 Query 105112 TGAAAAACTCCACGAAGT--TACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | || | ||||| || ||| | |||| | ||||| |||||| | || ||| Sbjct 6737 CCAGAAGTTGCACGATGTCGTAC--AGGTTGTCGTCCGTAACCTGAACAGAATCATCGAT 6794 Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 || | ||||| || | ||||| || || ||| |||||||||| |||||| Sbjct 6795 GTCAACTACTACCCTGTCCCGGAGGCTCGCAACAGCAACATGCGACACCGTCCCATTGGT 6854 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT-GATTCCG 105287 || |||||||||||||| || || ||| | | ||| || || || ||| || || Sbjct 6855 CTTGGTGTTCAGGGTCTTGCTGACACTTTCTTGGCATTG-CG-CATGCCTTTCGAGTCGC 6912 Query 105288 ACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGG 105347 || || | | | || || || || |||||||| || || | || ||||| Sbjct 6913 CTGAGGCCAGACAGCTGAACAAGCAAATTTTCGAGACCATCTACCATGGTGC-CTTGA-C 6970 Query 105348 CGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 | | || ||| | || ||||||| ||| | || |||| ||||| || || | Sbjct 6971 TGCCTCCATGGAGATTGCCAAGGTTGAGGGTACCTACTCCACCTACGAGGGCTCCCCTGT 7030 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACG 105461 || ||||| | ||||| | || |||| |||| || | | || | ||| | | Sbjct 7031 CTCCCAAGGTATTCTTCAGTACGACATGT-GGAATGTCACGCCGTCCGATCTT---TGGG 7086 Query 105462 ACTGG-GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 | ||| ||| |||||||||| |||||| |||| ||| | || |||||||| | | Sbjct 7087 ATTGGACCAGC-CTCAAGGAACAGATCAAGCAGAATGGTGTACGCAACAGTCTGTTGGTC 7145 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 ||||| ||||| || ||| ||| | || || ||||||| || || || || || || Sbjct 7146 GCTCCTATGCCCACTGCCAGCACATCCCAGATTCTGGGTAACAACGAGTGTTTCGAGCCT 7205 Query 105581 TACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 105639 ||||| |||||||||| ||| | | || || || ||||| | | || ||| Sbjct 7206 TACACTTCGAACATCTACTCT-CGTCGTGTGCTTGCTGGTGAGTTCCAGGTCGTTAACCC 7264 Query 105640 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCT 105696 || | | ||||| || || |||||||||||| | | |||||| | | | Sbjct 7265 TTGGCTTCTTAAGGACCTTGTCGATATGGGTCTCTGGTCCGATGGCATGAAGAACCGTAT 7324 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 ||| | || || ||||| |||| || ||| | ||||| | || || ||| Sbjct 7325 CATTGCCGAA---GGCGGTTCTGTTCAGAACATTCCTAACATTCCTACCGACATCAAGGC 7381 Query 105757 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 105816 | | ||| || |||||||||||| ||| || || | ||||| || || || Sbjct 7382 GCTCTACAAGACGGTTTGGGAAATCTCCCAGAAAACAGTTGTTCAGATGGCTGCTGACCG 7441 Query 105817 TGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATG-GAAAGTCCAACGAT 105873 |||| |||||||||||| || ||| |||| | |||| || || || || || Sbjct 7442 TGGTGCGTTCATTGATCAA--TCCCAGTCACTGAACATTCACATGAGAGAG-CCCACCAT 7498 Query 105874 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 105933 | |||| || | |||||| | | |||||| |||||||| || || ||||| Sbjct 7499 GGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGCTCGGTCTCAAGACCGGCATGTA 7558 Query 105934 TTACCTCCG-ATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGAACCAGA 105987 ||||| || | | ||| | ||| ||| |||||||||| | | || | ||| Sbjct 7559 CTACCTACGTACCCAAGCTGCTGCCGC-CCCTATTCAGTTCACTGTCGACCAAGA 7612 >seq3 Length=1020397 Score = 138 bits (152), Expect = 1e-27 Identities = 120/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||||||| |||||||| | || || || |||||||||||||||||| |||| ||| Sbjct 108463 CCTTTGCTCAGCGACTCATTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGTGCCT 108522 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 | | |||| | ||| | |||||||| ||||| ||||| ||||| ||||||||||| Sbjct 108523 TTGCCTCTATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACG 108582 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||||||||||||||| |||||| Sbjct 108583 AGCTCATCTCTCGTGACGAGGGTCTCCAC 108611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583254245606760