Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq21 262 4e-65 seq3 149 7e-31 seq15 145 8e-30 >seq21 Length=436828 Score = 262 bits (290), Expect = 4e-65 Identities = 508/748 (68%), Gaps = 4/748 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | |||||| |||||||| | || | | || ||| Sbjct 5857 TCATGCGTGTTGCCGTCGGTATCTGGGGTGACGATGTTGAGAAGGTTATTCAAACCTACA 5916 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 |||| ||| | |||||||| || || || | || || || || ||||| || ||| Sbjct 5917 ACTTGATGTCGAACAAGTACTTCACCCATGCTTCCCCCACTCTCTTTAACGCCGGAACGC 5976 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || | ||| |||| ||||||||| || | |||||||||||| || ||||| | Sbjct 5977 CACAAGCACAGTTGTCTTCCTGCTTCCTCGTCGATATGAAGGATGACAGCATTGACGGTA 6036 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || |||||| |||||| ||||||||| | | |||||||| ||| || Sbjct 6037 TCTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCTCA 6096 Query 53433 ACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || || | ||| |||||| | |||| | ||| || || ||||| | | | Sbjct 6097 ACA--TCCACCGTATCCGTGCTACCGGCTCTTATATCGCTGGAACCAACGGTACCTCGAA 6154 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 ||||| || || ||||| || |||||||| ||||| || | ||||| |||||||||| Sbjct 6155 CGGAATTGTACCCATGCTTCGTGTCTTCAATAACACTGCTAGATACGTTGACCAGGGTGG 6214 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||| | || | |||||||||||||| ||||| |||||| | || | | || Sbjct 6215 CAACAAGAGACCTGGTGCCTTCGCCATCTACCTTGAGCCTTGGCACTCGGATGTCTTCGA 6274 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 ||| ||||| || || ||| || || | || || | || |||||| || || Sbjct 6275 GTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGTGCCCGTGATCTTTTCTT 6334 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 ||||| |||||||| ||||| |||||| | || |||||| ||| |||||| | Sbjct 6335 GGCTCTCTGGATTCCCGACCTTTTCATGAAGCGTGTCGAGAAGAACGGCGAGTGGACTTT 6394 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 ||||||||| ||||||||||| ||||| | ||||||||| || |||||| | | | Sbjct 6395 GATGTGCCCCAACGAGTGCCCTGGCCTAGCTGATGTCTACGGCGACGAGTTTGAGGCTTT 6454 Query 53791 GTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850 ||| | ||| | | | | || ||| | ||||| ||||||||| || | || Sbjct 6455 GTACGAAAAGTATGAGGCTGAAGGTCGCGGCCGCCAGAAGATCAAGGCGCAGAAGCTGTG 6514 Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTC 53910 | |||| || || || |||| || || |||| || | |||| ||||||||| Sbjct 6515 GTATGCCATTCTTGAGGCCCAGACCGAAACCGGAAACCCCTTCATGCTTTACAAGGATCA 6574 Query 53911 GGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||| ||||||||||| |||||| Sbjct 6575 CTGCAACCGTAAGAGCAACCAAAAGAAC 6602 >seq3 Length=1020397 Score = 149 bits (164), Expect = 7e-31 Identities = 484/732 (66%), Gaps = 35/732 (5%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || |||||||| ||||| || || ||||||||||| || | | |||||||||||||| Sbjct 108910 TAGTCACCGACTCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 108851 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCC--CAAACTGTG-CCATGAGG 74579 ||||||| ||||| | | || ||| | |||||| | || | | ||| || Sbjct 108850 AAGTCGAAGGGGTTGCTGGAACGGTAGAC---CTTCTCGTTGCCAAGGGCGACCAACAGA 108794 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 || || || || || | ||||||||| |||| | | |||||||| || | Sbjct 108793 CGGTCAGCGACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGAAGGGCG 108734 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATCT 74697 || |||| ||||| || | ||||| |||| | | ||| ||| || | |||| Sbjct 108733 CAGGGCAAAGCCTCAGTCAAGAACTCCTTCTCAA--TGACAACGGCATCGGTGATGATCT 108676 Query 74698 TGTGAATG---TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCA 74753 | | |||| || ||| |||| || | ||||||||||| | ||| | || ||| Sbjct 108675 TCTCAATGAGGTCCTTGCCTGGGCGGTTCT---TCAGGTGAGAGAACAGCAGGCA-GGCG 108620 Query 74754 AACTCCTGATGCGAG-CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812 || || || ||| || || || | || | || || || || | ||| || || Sbjct 108619 AAGTCAGTGTG-GAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGG 108561 Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGAT---GGCACAGAAGGAACCACTGAAGAAGAT 74869 ||| || ||||||||||||||||| ||||| |||| |||| ||||||||||||||| Sbjct 108560 CATCAGACCACGCTTCTTCAACCAGAAGATAGAGGCA---AAGGCACCACTGAAGAAGAT 108504 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG-CATC--GGAAGTCAT 74926 || || || || ||||| | || || || || || | | | || | || || Sbjct 108503 ACCCTCAACGGCAGCGAAGGCAATGAGTCGCTGAGCAAAGGTAGACTTCTTGTCAGCGAT 108444 Query 74927 CCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGA 74985 ||| ||||||| ||||| || || || ||| |||| || || || || | || Sbjct 108443 CCATTGGAGAGCCCAGTCAGCCTTACGGCGGA-TGCAGGGGATGGTGTCAATGGCGTTGA 108385 Query 74986 AGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCT 75045 |||| | ||||| |||| ||||||| | | ||||| | ||| |||||||||| Sbjct 108384 AGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTAGGTATCAATGAGAAGAGAGTACGTCT 108325 Query 75046 CCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCT 75105 | || || || ||| | | |||| | ||||||| | || ||||| | |||| Sbjct 108324 CGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCT 108265 Query 75106 GTACAT--CCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGC 75163 | || | || |||| || | | | ||||| ||||||||||||| || ||||| Sbjct 108264 GAACTTCACCGCTGAATCGCTC--GACAAGGTTCTCGTTGACGATGCCGTCGGACGCGGC 108207 Query 75164 GAAAAAAGCCAG 75175 ||| || || || Sbjct 108206 GAAGAAGGCAAG 108195 >seq15 Length=521638 Score = 145 bits (160), Expect = 8e-30 Identities = 218/310 (70%), Gaps = 0/310 (0%) Strand=Plus/Minus Query 117291 ACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGAC 117350 |||| | || |||||| || || |||| || || ||||| ||||| || || | Sbjct 332919 ACGGGGAGAGACGAGTGTGGATATATCGAGCACTAGCGGCATCGGAACCACCTGCGAGTC 332860 Query 117351 GCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTT 117410 | | |||||| | ||| || || || | | ||| | |||||||| ||| |||||||| | Sbjct 332859 GAGAACCGAAATTTCCGCTAGGTTCGAGGCAGTTGACGTTGTTGGAGCCGACAAAGTTCT 332800 Query 117411 GAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCT 117470 |||| | | || || || || | | |||||||||||||| |||||||||| Sbjct 332799 GAGCTAGGCCGATGATAGTCTGCTGCAAAGATACTTCACCATGGTGATAGGCCGTCTGCT 332740 Query 117471 CCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGC 117530 | | ||||| |||||||| | |||||| ||||| ||| | ||| |||||| | Sbjct 332739 CTGAGACGTAACCCGCCAGTTCGATAACCTTCTTGTCTTTCGTTAAGTTTCTCTTGAAAC 332680 Query 117531 AGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAAC 117590 ||||||| || ||||| ||||||| || || ||||| || | ||| |||||| |||| Sbjct 332679 AGGCATAGATGACCTTTCGCTGACCAGGTTTTAGACCGTCGACGACGGAAGGGATGGAAC 332620 Query 117591 GCTTGATGTC 117600 || | |||| Sbjct 332619 GCATATTGTC 332610 Score = 136 bits (150), Expect = 4e-27 Identities = 210/300 (70%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 152025 ACGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAA 152084 ||| ||| ||| ||||| | || || ||||| |||||||| || || | || || Sbjct 332909 ACGAGTGTGGATATATCGAGCACTAGCGGCATCGGAACCACCTGCGAGTCGAGAACCGAA 332850 Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144 | ||| || |||||| ||||| |||||||| ||| || || |||||||| | Sbjct 332849 ATTTCCGCTAGGTTCGAGGCAGTTGACGTTGTTGGAGCCGACAAAGTTCTGAGCTAGGCC 332790 Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204 | || || ||||| | ||||||| |||||||| ||||||||||| | || ||| Sbjct 332789 GATGATAGTCTGCTGCAAAGATACTTCACCATGGTGATAGGCCGTCTGCTCTGAGACGTA 332730 Query 152205 TCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAAT 152264 ||||||| | |||||| |||| |||| | ||| |||||| |||||| || || Sbjct 332729 ACCCGCCAGTTCGATAACCTTCTTGTCTTTCGTTAAGTTTCTCTTGAAACAGGCATAGAT 332670 Query 152265 CACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||||| ||||| ||||| | |||||| || ||| ||| || |||||| | |||| Sbjct 332669 GACCTTTCGCTGACCAGGTTTTAGACCGTCGACGACGGAAGGGATGGAACGCATATTGTC 332610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209850660200