Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq21 269 3e-67 seq1 167 3e-36 seq39 158 1e-33 seq83 156 5e-33 seq15 123 3e-23 >seq21 Length=436828 Score = 269 bits (298), Expect = 3e-67 Identities = 1124/1755 (64%), Gaps = 59/1755 (3%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || ||||||||||| |||||||| || ||||||||| | |||||| Sbjct 7570 GTACGTAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGTGAAGTGCATGCTG 7511 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTC-CATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 ||| ||| | | ||||| | ||| |||| |||||||| ||||| || ||| || Sbjct 7510 GTGATCTTGCCCATGGTGGGCT-CTCTCATGTGAATGTTCAGTGACTGGGATTGATCAAT 7452 Query 80157 GAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216 ||| || ||||| || || ||||| | || || || || || | |||||||| || || Sbjct 7451 GAACGCACCACGGTCAGCAGCCATCTGAACAACTGTTTTCTGGGAGATTTCCCAAACCGT 7392 Query 80217 ACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACTGCCACC 80270 || | |||| || | || ||||||| || || || ||| || || Sbjct 7391 CTTGTAGAGCGCCTT--GATG-TCGGTAGGAATGTTAGGAATGTTCTGAACAGAACCGCC 7335 Query 80271 GTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTT 80330 || | || | || |||| || | ||||| ||| | | | || || || Sbjct 7334 TTCGGCAATGATACGGTTCTTCATGCCATCGGACCAGAGACCCATATCGACAAGGTCCTT 7275 Query 80331 CACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGT 80389 | ||| ||||| | ||||| || || || ||||| ||| || | || Sbjct 7274 AAGAAGCCAAGGGTTAACGACCTGGAACTCACCAGCAAGCACACGACG-AGAGTAGATGT 7216 Query 80390 TTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCG 80449 | | |||||||||||| || ||||||||| || || ||||| | ||||| || || | Sbjct 7215 TCGAAGTGTAAGGCTCGAAACACTCGTTGTTACCCAGAATCTGGGATGTGCTGGCAGTGG 7156 Query 80450 GCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTCGCG-- 80504 |||| || |||||||||| || || | || | || |||||| | ||| | | Sbjct 7155 GCATAGGAGCGACCAACAGACTGTTGCGTACACCATTCTGCTTGATCTGTTCCTTGAGGC 7096 Query 80505 ----CAAATCTGACCAAAAATCAACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAA 80558 | |||| ||||| ||| ||| ||||| ||||||||||| ||| | Sbjct 7095 TGGTCCAATC---CCAAAGATCGG-----ACGGCGTGACATTCCACATGTCGTACTGAAG 7044 Query 80559 GATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAG 80618 || || | || | || || ||| || | || ||| | ||||| |||||| | Sbjct 7043 AATACCTTGGGAGACAGGGGAGCCCTCGTAGGTGGAGTAGGTACCCTCAACCTTGGCAAT 6984 Query 80619 CTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACC 80678 ||| || | | | ||| | || || ||| ||| || | |||||||| Sbjct 6983 CTCCATGGAGGCAGTCAAGGCACCATGGTAGATGGTCTCGAAAATTTGCTTGTTCAGCTG 6924 Query 80679 GCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTG 80738 | |||| || ||||| | || || || || ||| |||||| || ||||| Sbjct 6923 TCTGGCCTCAGGCGACTCGAAAGGCATGCGCAATGCCAAGAAAGTGTCAGCAAGACCCTG 6864 Query 80739 AACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAATTGGGT 80797 ||| || | | || || ||||| ||| |||| | | || |||||||| | |||| Sbjct 6863 AACACCAAGACCAATGGGACGGTGTCGCATGTT-GCTGTTGCGAGCCTCCGGGACAGGGT 6805 Query 80798 AAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAA 80857 | |||| |||||||| | ||||||||| || |||||| || ||||| || | Sbjct 6804 AGTAGTTGACATCGATGATTCTGTTCAGGTTACGGACGACAACCTGTACGACATCGTGCA 6745 Query 80858 GTTTCTGAAAGTCGAATTGGTTCCCCT--------TCA-CAAATGCCGGAAGGCTCAGGG 80908 ||||| |||||| | ||| |||| ||| | || | ||| || || | Sbjct 6744 ACTTCTGGAAGTCGTA---GTTGCCCTCGTTATAATCAACGAAAGACGGCAGAGCGAGAG 6688 Query 80909 ACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACA 80968 | |||| ||||| || || ||||| |||| | | |||||| || || ||||||| Sbjct 6687 AAGCCAAGTTGCAGACAGCGACCTCATCAGGCGCCGAGTACTCGATAATCTCAGTGCACA 6628 Query 80969 AATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCT 81028 || || ||| ||||| ||||| || ||||| ||| |||||| |||| Sbjct 6627 GGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTACGGTTGCAGTGATCCT 6568 Query 81029 TGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCT 81088 |||| |||| | ||| | ||||| ||| ||| | || || ||||| | ||| | || Sbjct 6567 TGTAAAGCATGAAGGGGTTTCCGGTTTCGGTCTGGGCCTCAAGAATGGCATACCACAGCT 6508 Query 81089 CGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGT 81148 ||||||||| | || |||| ||||| ||| ||||||| |||| | | Sbjct 6507 TCTGCGCCTTGATCTTCTGGCGGCCGCGACCTTCAGCCTCATACTTTTCGTACAAAGCCT 6448 Query 81149 CGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCC 81208 | |||| | | |||| | |||| ||| | ||||||||||| |||||||||| || Sbjct 6447 CAAACTCGTCGCCGTAGACATCAGCTAGGCCAGGGCACTCGTTGGGGCACATCAAAGTCC 6388 Query 81209 AGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACA 81268 | ||| || ||||| ||| |||||||||| ||| || |||||||| || ||| | Sbjct 6387 ACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAGAGAGCCAAGAAAA 6328 Query 81269 GGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGA 81328 | || ||| || | ||||| | || ||||| ||| | ||||| || || | || Sbjct 6327 GATCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCGAAGA 6268 Query 81329 TGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTGCGACGGCCAC 81382 |||| ||||| ||||| || || | ||||| | || | |||| ||||| Sbjct 6267 CATCCGAGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACCAGGTCTCTTG---TTGCCAC 6211 Query 81383 CCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTG 81442 |||||| ||||| | ||||| || || ||||| | ||| || | || || | | Sbjct 6210 CCTGGTCAACGTATCTAGCAGTGTTATTGAAGACACGAAGCATGGGTACAATTCCGTTCG 6151 Query 81443 ACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGAC 81502 | |||||| || || ||||| || || | || || | | ||| |||| Sbjct 6150 AGGTACCGTTGGTTCCAGCGATATAAGAGCCGGTAGCACGGATACGGTGGATGTTGAGAC 6091 Query 81503 CGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCT 81562 | || ||||| | | ||| || ||| ||||| || | ||| || || || || | Sbjct 6090 CAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAGATACCGT 6031 Query 81563 CGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG- 81621 | ||||| || | ||||| || | | ||| ||| |||| || | |||| | | | Sbjct 6030 CAATGCTGTCATCCTTCATATCGACGAGGAAGCAGGAAGACAACT--GTGCTTGTGGCGT 5973 Query 81622 -CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATA 81680 ||||| || || || || |||| || || |||| || ||| ||||||| || || Sbjct 5972 TCCGGCGTTAAAGAGAGTGGGGGAAGCATGGGTGAAGTACTTGTTCGACATCAAGTTGTA 5913 Query 81681 GGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740 ||||| | || || ||||||||| ||||||| || |||||||| | ||| Sbjct 5912 GGTTTGAATAACCTTCTCAACATCGTCACCCCAGATACCGACGGCAACACGCATGATCAT 5853 Query 81741 GTACTGGGGCGTCTC 81755 || ||| || |||| Sbjct 5852 GTGCTGCGGTCTCTC 5838 >seq1 Length=1159409 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || ||||||||||| ||||| Sbjct 850343 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 850284 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || ||||||||||||||||| || ||||| ||||| Sbjct 850283 GACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAA 850224 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| ||||||||||| || ||||||| || || || | || || || Sbjct 850223 CAGCGATTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCGGATTACAAC 850164 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||| || || || ||| | ||||| || ||||| Sbjct 850163 ATCCAAAAGGAGAGCACCCTCCACCTTGTCCTCCGTCTCCGTGGTGG 850117 Score = 154 bits (170), Expect = 2e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| ||||| || ||||| ||||| || | || | Sbjct 850042 GTCAAGACCCTCACCGGAAAGACCATTACCCTCGAGGTCGAGTCGTCCGACACAATCGAC 849983 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || |||||||||||||| || ||||| || ||||| |||||||| || Sbjct 849982 AATGTCAAGTCAAAGATTCAGGACAAGGAAGGCATTCCCCCCGACCAACAGCGTCTGATC 849923 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || |||||||| ||||| | || |||||| | ||||| || | || |||||| Sbjct 849922 TTCGCCGGCAAGCAACTTGAGGACGGCCGAACCCTATCCGACTACAACATTCAGAAGGAA 849863 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||| || || ||| | ||||| || ||||| Sbjct 849862 TCTACTCTCCACCTTGTCCTTCGTCTCCGTGGTGG 849828 Score = 149 bits (164), Expect = 7e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| || || | || ||||| || Sbjct 849598 ATGCAGATCTTCGTCAAGACCTTGACGGGCAAGACGATCACATTGGAAGTTGAATCTTCG 849539 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | ||| || || ||||||||||||||||| || || || ||| Sbjct 849538 GATACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCTGATCAG 849479 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| || || |||||||||||| | ||||||| ||| ||||| ||| ||||| || Sbjct 849478 CAACGTCTTATCTTCGCTGGTAAGCAATTGGAGGATGGTCGCACCCTGAGC-GACTACAA 849420 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || || | ||| | ||||| || |||||||| Sbjct 849419 CATCCAGAAGGAGTCCACGCTCCACTTGGTCCTCCGTCTCCGTGGTGGACA 849369 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| || || || ||||| ||||| Sbjct 849826 ATGCAAATCTTCGTCAAGACCCTCACCGGTAAGACGATCACCCTCGAGGTGGAGTCGTCG 849767 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || || ||||||||||| || || || ||||| Sbjct 849766 GACACCATCGACAACGTTAAGTCGAAGATCCAAGACAAGGAGGGTATCCCGCCTGACCAA 849707 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || ||||| |||||||| || ||||| | || || || ||| ||||| || Sbjct 849706 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAGGACGGCCGAACTCTCAGC-GACTACAA 849648 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || | || ||||| ||||| Sbjct 849647 CATTCAGAAGGAGTCTACCCTCCACCTTGTTCTTCGACTTCGTGGTGG 849600 >seq39 Length=338136 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 215094 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCT 215035 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | || | ||| | ||| | || ||||||||||||||||| || || || ||| Sbjct 215034 TCCGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGAC 214975 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| | || || || || ||||| |||||||||| || ||||| | ||||| Sbjct 214974 CAGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTAC 214915 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| || || || ||| | ||||| || ||||| Sbjct 214914 AACATCCAGAAGGAGAGCACCCTCCACCTCGTCCTCCGTCTGCGTGGTGG 214865 >seq83 Length=135873 Score = 156 bits (172), Expect = 5e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 25497 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCAT 25556 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || ||||||||||||||||||||||| || ||||| |||||||| Sbjct 25557 CGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAACAGCGTCT 25616 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || |||||||||||||| | || || || | ||||| || |||| || Sbjct 25617 GATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACGCTCTCTGACTACAACATCCAGAA 25676 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| |||||||| || || || | ||||| || ||||| Sbjct 25677 GGAGTCCACTCTCCACCTGGTGCTCCGTCTCCGTGGTGG 25715 >seq15 Length=521638 Score = 123 bits (136), Expect = 3e-23 Identities = 213/309 (69%), Gaps = 3/309 (1%) Strand=Plus/Plus Query 31948 GCTGAAGATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGC 32007 ||||| |||| ||| ||||| || ||| | ||||| || || ||| ||||| Sbjct 332607 GCTGACAATAT---GCGTTCCATCCCTTCCGTCGTCGACGGTCTAAAACCTGGTCAGCGA 332663 Query 32008 AAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTG 32067 ||||| || || ||||| |||||| ||| | ||| |||| |||||| | ||| Sbjct 332664 AAGGTCATCTATGCCTGTTTCAAGAGAAACTTAACGAAAGACAAGAAGGTTATCGAACTG 332723 Query 32068 TCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACC 32127 |||| ||||| ||||||| |||||||||||||| || || | || | ||| || Sbjct 332724 GCGGGTTACGTCTCAGAGCAGACGGCCTATCACCATGGTGAAGTATCTTTGCAGCAGACT 332783 Query 32128 ATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCT 32187 || || ||| ||||||||||||||||| | || ||| | |||| ||||| || Sbjct 332784 ATCATCGGCCTAGCTCAGAACTTTGTCGGCTCCAACAACGTCAACTGCCTCGAACCTAGC 332843 Query 32188 GGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTC 32247 ||| | || || | || ||||| ||||| ||||| || || | || || ||| | Sbjct 332844 GGAAATTTCGGTTCTCGACTCGCAGGTGGTTCCGATGCCGCTAGTGCTCGATATATCCAC 332903 Query 32248 ACCCGTCTC 32256 || |||||| Sbjct 332904 ACTCGTCTC 332912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570303991136880