Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq47 93.3 3e-14 >seq47 Length=246405 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/206 (71%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670 |||||||| ||| || || | || ||||||| | ||| | || || ||||||| ||| Sbjct 133072 GGGAAAGG-TCTCGGTTCGCGTTCTAGCTGAACCTTCAAAGCATCAACATGGTCAATGTA 133130 Query 29671 GACGTGAGCATCTCCCAGG--GTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29728 ||||| ||||| |||| | ||||| | | ||| || || | || | ||||| Sbjct 133131 CACGTGGGCATCGCCCATGACGTGTGTA-AGACTA-CCTGGGACCAGATTGCATACGTGC 133188 Query 29729 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATG 29788 |||| ||| | ||||| || | |||||||||||||| || || || || || |||||| Sbjct 133189 GCCAGCATATGTGTGAGCAGCGCATAGCTGGCGATGTTGAAAGGAACACCAAGACCCATG 133248 Query 29789 TCCCCTGACCTCTGGTAGAGCTGGCA 29814 || | || | |||||| || ||||| Sbjct 133249 TCGCAAGAGCGCTGGTATAGTTGGCA 133274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406158749847514