Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq21 199 5e-46 >seq21 Length=436828 Score = 199 bits (220), Expect = 5e-46 Identities = 1185/1876 (63%), Gaps = 43/1876 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || |||||||| || | | || | || |||||||| |||||||| || || || ||| Sbjct 7600 GTGAACTGAATAGGGGCGGCAGCAGCTTGGGTACGTAGGTAGTACATGCCGGTCTTGAGA 7541 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| || ||| |||||||| || | ||| | || || || Sbjct 7540 CCGAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCTCTCTCATG 7481 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| |||| ||||| |||||| ||||| || || | ||||| ||||| | | | Sbjct 7480 TGAATGTTCAGTGACTGGGATTGATCAATGAACGCACCACGGTCAGCAGCCATCTGAACA 7421 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 | || || || | |||||||||| || ||| | | ||||| || |||| | Sbjct 7420 ACTGTTTTCTGGGAGATTTCCCAAACCGTCTTGTAGAGCGCCTTGATGTCGGTAGGAATG 7361 Query 77022 TTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | | || |||| ||||| || || | || || ||||| || |||| | Sbjct 7360 TTAGGAATGTTCTGAACAGAACCGCCTTCGGCAATGATACGGTTCTTCATGCCATCGGAC 7301 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | | | || | | |||| || ||| ||||| | || || || ||| Sbjct 7300 CAGAGACCCATATCGACAAGGTCCTTAAGAAGCCAAGGGTTAACGACCTGGAACTCACCA 7241 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | | || | ||||| ||| || || || || || || | | | || ||||| ||| Sbjct 7240 GCAAGCACACGACGAGAGTAGATGTTCGAAGTGTAAGGCTCGAAACACTCGTTGTTACCC 7181 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||| || | || ||||| |||||||| || ||||| | ||| || | | |||| Sbjct 7180 AGAATCTGGGATGTGCTGGCAGTGGGCATAGGAGCGACCAACAGACTGTTGCGTACACCA 7121 Query 77259 TG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 | || | |||| | || || || |||||||||||||||| || || |||| Sbjct 7120 TTCTGCT-TGATCTGTTCCTTGAGGCTGGTCCAATCCCAAAGATCGGACGGCGTGACATT 7062 Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAG-CATATGATCCATTATATGTTTCATAAG 77376 ||| | ||||| || ||||| || || || || || || | || || || | Sbjct 7061 CCACATGTCGTACTGAAGAATACC-TTGGGAGACAGGGGAGCCCTCGTAGGTGGAGTAGG 7003 Query 77377 GTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436 || || | || | || || ||| || || | || || || |||| Sbjct 7002 TACCCTCAACCTTGGCAATCTCCATGGAGGCAGTCAAGGCACCATGGTAGATGGTCTCGA 6943 Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG---AA 77493 |||| | ||| || || | | || ||| || || || ||| || || Sbjct 6942 AAATTTGCTTGTTCAGCTGTCTGGCCTCAGGCGACTCGAAAGGC--ATGCGCAATGCCAA 6885 Query 77494 TAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 77553 |||| || || | |||||||| |||| |||||| || | |||| | | ||| Sbjct 6884 GAAAGTG-TCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGT 6826 Query 77554 TTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAA 77613 | ||| || || | ||| || || || | || || ||| | || || || | || | Sbjct 6825 TGCGAGCCTCCGGGACAGGGTAGTAGTTGACATCGATGATTCTGTTCAGGTTACGGACGA 6766 Query 77614 CTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC--TATAACAAAC-- 77669 | || | || || || | | || | || || | | || || ||||| ||| Sbjct 6765 CAACCTGTACGACATCGTGCAACTTCTGGAAGTCGTAGTTGCCCTCGTTATAATCAACGA 6706 Query 77670 ATGTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATT 77727 | | || ||| | ||| || | || || || || ||||||| || | || | Sbjct 6705 AAGACGGCAGAGCGAGAGAAGCCAAGTTGCAGACAGCGACCTCATCAGGCGCCGAGTACT 6646 Query 77728 GTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCT 77787 || ||||| || || || || | ||||| || || || | ||||||||||| Sbjct 6645 CGATAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCT 6586 Query 77788 TTTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCG 77846 | ||||| ||| ||||| ||||| || || || | |||||||| |||| | || Sbjct 6585 TACGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGGTTTCCGGTTTCGGTCTGGGCCTCA 6527 Query 77847 ATAATAGATTTCCAGACGACTCTA-GCTTTTATCATAGATTTGTATCGCCTCTCTCTTTC 77905 | ||| | | ||| | | ||| || || ||| | | || | || || Sbjct 6526 AGAATGGCATACCACA-GCTTCTGCGCCTTGATCTTCTGGCGGCCGCGACCTTCAGCCTC 6468 Query 77906 ATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCAT 77963 ||| || ||| | |||| ||||| || || || | |||||| | | |||||||| Sbjct 6467 ATACTTTTCGTACAAAGCC--TCAAACTCGTCGCCGTAGACATCAGCTAGGCCAGGGCAC 6410 Query 77964 TCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCA 78023 || || ||||||||||| | ||| || || | | || || || ||||| || || || Sbjct 6409 TCGTTGGGGCACATCAAAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCG 6350 Query 78024 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTT 78083 || ||||| ||||| | || ||||| |||| | ||| || || || ||||| Sbjct 6349 GGAATCCAGAGAGCCAAGAAAAGATCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTG 6290 Query 78084 TTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACT 78143 ||| ||||| ||||| | | ||| || ||||| || || || || || || | | Sbjct 6289 CGAAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAAGGTAGATGGCGAAGGCA 6230 Query 78144 CCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAAC 78203 ||||||| || || || ||||| || | ||||| || |||||||| | || | | | Sbjct 6229 CCAGGTCTCTTGTTGCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAAGACACGAAGC 6170 Query 78204 ATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGA 78263 || || | ||| ||||| || || || || ||||||| |||||| || | || || Sbjct 6169 ATGGGTACAATTCCGTTCGAGGTACCGTTGGTTCCAGCGATATAAGAGCCGGTAGCACGG 6110 Query 78264 ATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTC 78323 ||| ||| | || || || || |||||||| || || | || || || Sbjct 6109 ATACGGTGGATGTTGAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTG 6050 Query 78324 AATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGAC 78383 | |||||||||||||| || || ||||||||| |||| | | || || ||| |||| Sbjct 6049 AGGGTATCGTAGATACCGTCAATGCTGTCATCCTTCATATCGACGAGGAAGCAGGAAGAC 5990 Query 78384 ATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTT 78443 | || || ||||| || ||||| | || || || ||||| || || | || Sbjct 5989 AACTGTGCTTGTGGCGTTCCGGCGTTAAAGAGAGTGGGGGAAGCATGGGTGAAGTACTTG 5930 Query 78444 TCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCT----AT-GTC-CCATTGATGAATT 78497 | || | | ||||| |||| |||| | |||| || ||| || | || Sbjct 5929 TTCGACATCAAGTTGTAGGTTTGAATAAC--CTTCTCAACATCGTCACCCCAG----ATA 5876 Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557 || || || |||||||| | ||| ||||| ||||| || || |||| | || | || Sbjct 5875 CCGACGGCAACACGCATGATCATGTGCTGCGGTCTCTCTACAATCTTCTCATCAAGCTTG 5816 Query 78558 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCT 78615 | |||||| ||| ||||| || || |||||||| || | ||| ||||| || || | Sbjct 5815 AGCAAGTAAGATCGCTCCAAGGTCTTGAAACCAAAGTATTGGTAGTTGAAA--TCCCTGT 5758 Query 78616 CGTAAATAATAACAGA 78631 | || | ||| |||| Sbjct 5757 CATAGACAATGGCAGA 5742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660993659360