Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq21 259 7e-64 >seq21 Length=436828 Score = 259 bits (286), Expect = 7e-64 Identities = 1187/1853 (64%), Gaps = 45/1853 (2%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||||||||| || | || || | || |||||||| |||||||| || || || ||| Sbjct 7600 GTGAACTGAATAGGGGCGGCAGCAGCTTGGGTACGTAGGTAGTACATGCCGGTCTTGAGA 7541 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || || |||| || ||| |||||||| || | ||| | || || || Sbjct 7540 CCGAGCTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCTCTCTCATG 7481 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| |||| ||||| |||||| ||||| || || | ||||| ||||| | | | Sbjct 7480 TGAATGTTCAGTGACTGGGATTGATCAATGAACGCACCACGGTCAGCAGCCATCTGAACA 7421 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 | || || || | |||||||||| || ||| | | ||||| || |||| Sbjct 7420 ACTGTTTTCTGGGAGATTTCCCAAACCGTCTTGTAGAGCGCCTTGATGTCGGTAGGAATG 7361 Query 75617 TTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 || | | || |||| || ||||| || | || || ||||| || |||| | Sbjct 7360 TTAGGAATGTTCTGAACAGAACCGCCTTCGGCAATGATACGGTTCTTCATGCCATCGGAC 7301 Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733 || | | ||| | | |||| || ||| ||||| | || || || ||| Sbjct 7300 CAGAGACCCATATCGACAAGGTCCTTAAGAAGCCAAGGGTTAACGACCTGGAACTCACCA 7241 Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793 | | || | |||| ||| || || || || || || | | | || ||||| ||| Sbjct 7240 GCAAGCACACGACGAGAGTAGATGTTCGAAGTGTAAGGCTCGAAACACTCGTTGTTACCC 7181 Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853 | ||| || | || ||||| |||||||| || ||||| | ||| || | | |||| Sbjct 7180 AGAATCTGGGATGTGCTGGCAGTGGGCATAGGAGCGACCAACAGACTGTTGCGTACACCA 7121 Query 75854 TG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912 | || | |||| | || || || |||||||||||||||| || || |||| Sbjct 7120 TTCTGCT-TGATCTGTTCCTTGAGGCTGGTCCAATCCCAAAGATCGGACGGCGTGACATT 7062 Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAG-CATATGATCCATTATATGTTTCGTAAG 75971 ||| | ||||| || ||||| || ||| || || || || | || || ||| | Sbjct 7061 CCACATGTCGTACTGAAGAATACC-TTGGGAGACAGGGGAGCCCTCGTAGGTGGAGTAGG 7003 Query 75972 TCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCT-AACGCACCGTAATAAATTGTTTCG 76030 | || || | || | || || | | | || ||||| | || || || ||| Sbjct 7002 TACCCTCAACCTTGGCAATCTC-CATGGAGGCAGTCAAGGCACCATGGTAGATGGTCTCG 6944 Query 76031 AAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGG-AT----AATGTAAAA 76085 ||||| | ||| || || | | || ||| | || ||||| || |||| || Sbjct 6943 AAAATTTGCTTGTTCAGCTGTCTGGCCTCAGGCGACTCGAAAGGCATGCGCAATGCCAA- 6885 Query 76086 GAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGG 76145 ||| | || || || || |||||||| |||| |||||| || | |||| | | ||| Sbjct 6884 GAA--AGTG--TCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGC 6829 Query 76146 AAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGA 76205 | ||| || || | |||||| || || | ||| || ||| | || || || | || Sbjct 6828 TGTTGCGAGCCTCCGGGACAGGGTAGTAGTTGACATCGATGATTCTGTTCAGGTTACGGA 6769 Query 76206 CAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC--TATCACAAA 76263 | || || | || || || | | || | || || | || || || ||| | || Sbjct 6768 CGACAACCTGTACGACATCGTGCAACTTCTGGAAGTCGTAGTTGCCCTCGTTATAATCAA 6709 Query 76264 CATATTA----AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCAT 76319 | | | ||||| | ||| || | || || || || ||||||| || | | Sbjct 6708 CGAAAGACGGCAGAGCGAGAGAAGCCAAGTTGCAGACAGCGACCTCATCAGGCGCCGAGT 6649 Query 76320 ATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGC 76379 | | || ||||| ||||| || || | ||||| ||||| || | |||||||| Sbjct 6648 ACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGC 6589 Query 76380 TCTTTTTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGAT 76438 |||| ||| || ||| ||||| ||||| | || || |||| ||||| |||| | Sbjct 6588 TCTTACGGTTGCAGTGA-TCCTTGTAAAGCATGAAGGGGTTTCCGGTTTCGGTCTGGGCC 6530 Query 76439 TCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTATCG--CTTCTCT 76495 || | ||| | | ||| | | ||| || || || | | || |||| Sbjct 6529 TCAAGAATGGCATACCACA-GCTTCTGCGCCTTGATCTTCTGGCGGCCGCGACCTTCAGC 6471 Query 76496 CTTTCATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAG 76553 || |||| | | ||| | | || ||||| || || || | |||||| | | |||| Sbjct 6470 CT--CATACTTTTCGTACAAAGCC--TCAAACTCGTCGCCGTAGACATCAGCTAGGCCAG 6415 Query 76554 GACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGA 76613 | || || || || |||||||| | |||||| || | | || || || ||||| || | Sbjct 6414 GGCACTCGTTGGGGCACATCAAAGTCCACTCGCCGTTCTTCTCGACACGCTTCATGAAAA 6355 Query 76614 GATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTAT 76673 | || || ||||| ||||| | || ||||| |||| | ||| || || || | Sbjct 6354 GGTCGGGAATCCAGAGAGCCAAGAAAAGATCACGGGCACGGACTTCCTCCTTGCCGTGGT 6295 Query 76674 TCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCA 76733 |||| ||| || |||||||| | | ||| || ||||| || || || || || || | Sbjct 6294 TCTTGCGAAGGTCGAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAAGGTAGATGGCGA 6235 Query 76734 TAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTC 76793 |||| |||| || || || ||||| || | ||||| ||||||||||| | || | Sbjct 6234 AGGCACCAGGTCTCTTGTTGCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAAGACAC 6175 Query 76794 TCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATG 76853 | ||| || | ||| ||||| || ||||| || ||||||| |||||| || | Sbjct 6174 GAAGCATGGGTACAATTCCGTTCGAGGTACCGTTGGTTCCAGCGATATAAGAGCCGGTAG 6115 Query 76854 CACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913 |||| ||| || || || || || || ||||| || ||||| | |||||| Sbjct 6114 CACGGATACGGTGGATGTTGAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGG 6055 Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973 || | || || ||||| || || || || |||||| |||| | | || || ||| Sbjct 6054 TCTTGAGGGTATCGTAGATACCGTCAATGCTGTCATCCTTCATATCGACGAGGAAGCAGG 5995 Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033 ||||| || || ||||| || ||||| | || || || ||||| ||||| Sbjct 5994 AAGACAACTGTGCTTGTGGCGTTCCGGCGTTAAAGAGAGTGGGGGAAGCATGGGTGAAGT 5935 Query 77034 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCT--ATATC-CCATTGATGAA 77090 | || | || | | ||||| |||| |||||| ||||| | ||| || | | Sbjct 5934 ACTTGTTCGACATCAAGTTGTAGGTTTGAATAAC--CTTCTCAACATCGTCACCCCAG-A 5878 Query 77091 TTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTT 77150 | || || || |||||||| | ||| ||||| |||| |||||| |||| | || | | Sbjct 5877 TACCGACGGCAACACGCATGATCATGTGCTGCGGTCTCTCTACAATCTTCTCATCAAGCT 5818 Query 77151 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 77201 | | |||||| ||| ||||| || || |||||||| || | ||| ||||| Sbjct 5817 TGAGCAAGTAAGATCGCTCCAAGGTCTTGAAACCAAAGTATTGGTAGTTGAAA 5765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712926388399680