Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq39 150 1e-31 seq1 136 3e-27 seq83 129 4e-25 >seq39 Length=338136 Score = 150 bits (166), Expect = 1e-31 Identities = 163/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||||||||||| ||||||||||| |||| ||| || | || || Sbjct 214883 ACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCG 214942 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| |||||||| || | || | || ||||| ||| Sbjct 214943 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 215002 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||||| || |||||||| | || || |||| Sbjct 215003 ATCTTGGACTTGACATTGT--CGATAGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCT 215060 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 | |||||||||||||| |||||||| |||||||| Sbjct 215061 TGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 215094 >seq1 Length=1159409 Score = 136 bits (150), Expect = 3e-27 Identities = 158/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || |||||||||||||||||||||||||| | || ||| | || || Sbjct 850135 ACAAGGTGGAGGGTGCTCTCCTTTTGGATGTTGTAATCCGACAGAGTGCGGCCATCCTCA 850194 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || ||||| ||||| || || | ||| | ||| ||||| ||| Sbjct 850195 AGCTGCTTACCAGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGA 850254 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||||| ||| || ||||| | || || |||| Sbjct 850255 ATCTTGGACTTGACATTGT--CAATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCT 850312 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||| ||||| |||||||| ||||| Sbjct 850313 TGCCAGTGAGAGTCTTGACGAAGATCTGCAT 850343 Score = 131 bits (144), Expect = 1e-25 Identities = 160/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG--GCGAGTTGGCGCTCGTCGT 44186 || ||||| || || |||||| || |||||||| ||| | ||||| | || |||| | Sbjct 849618 ACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGCTGAGAGTTCG-GC-CGTCCT 849675 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 |||||||||| || |||||||| | ||||| || || | || | ||| ||||| || Sbjct 849676 CCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGGTCAGGCGGGATACCCTCCTTGTCTT 849735 Query 44247 TTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||| || ||| | |||||||| | || |||||||| | || |||||| Sbjct 849736 GGATCTTCGACTT-AACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATCGTC 849794 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| |||||||||||||| Sbjct 849795 TTACCGGTGAGGGTCTTGACGAAGATTTGCAT 849826 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| |||||| |||||| ||||||||||| ||| || ||| | || ||| Sbjct 849390 ACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCC 849449 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||| || || ||||| | ||| |||||||| | || | || ||||| ||| Sbjct 849450 AATTGCTTACCAGCGAAGATAAGACGTTGCTGATCAGGTGGGATTCCCTCCTTGTCCTGG 849509 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || || || | ||||| || |||| || |||||||| Sbjct 849510 ATCTTGCTCTTGACGTTGTCGATCGTATCCGAAGATTCAACTTCCAATGTGATCGTCTTG 849569 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | |||||| |||||||| ||||| Sbjct 849570 CCCGTCAAGGTCTTGACGAAGATCTGCAT 849598 Score = 105 bits (116), Expect = 5e-18 Identities = 145/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || ||||| || |||||||| |||| || || |||| || Sbjct 849846 ACAAGGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCGTCCTCA 849905 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||| |||||| || || | || | |||||||| ||| Sbjct 849906 AGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGA 849965 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||||| || || ||||| | ||||| |||| Sbjct 849966 ATCTTTGACTTGACATTGT--CGATTGTGTCGGACGACTCGACCTCGAGGGTAATGGTCT 850023 Query 44307 TTCCCGTGAGGGTCTTCACGA 44327 |||| ||||||||||| |||| Sbjct 850024 TTCCGGTGAGGGTCTTGACGA 850044 >seq83 Length=135873 Score = 129 bits (142), Expect = 4e-25 Identities = 152/204 (75%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||| |||||| ||||||||||| || | ||| || |||| || Sbjct 25698 CACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTTCGGCCGTCCTC 25639 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| ||||||| |||||| || || | || | || ||||| ||| Sbjct 25638 GAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGGGGAATTCCCTCCTTGTCCTG 25579 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | |||||||||| || |||||||| | || || ||| Sbjct 25578 AATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 25521 Query 44306 TTTCCCGTGAGGGTCTTCACGAAG 44329 || ||||| ||||||||||||||| Sbjct 25520 TTGCCCGTCAGGGTCTTCACGAAG 25497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986455742683