Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq19 129 1e-24
seq35 89.7 1e-12
>seq19
Length=350955
Score = 129 bits (142), Expect = 1e-24
Identities = 163/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473
|||||||| | || ||| | || ||| ||| | ||||||||||| | || |||
Sbjct 189938 AGGAGTTCCTGACGGAGGCTCTGCCCTGTGCCCTACTAGGCATGAACGCCAACCTCATGA 189997
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
||||||||||| ||||| ||||||||| | | || || || || ||||||| ||||
Sbjct 189998 AGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTGGTGGCCCTCGGCAACGAGAAGGTGT 190057
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
|| ||| | |||||||| | || |||||| ||| || || || ||||||||||
Sbjct 190058 ACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 190117
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||| ||||| || |||| || |||| | | ||||| |||
Sbjct 190118 TCTTCGAGAAGCGCGTTGGTGATTACCAGAAGGCCGGTGTCATG 190161
>seq35
Length=266941
Score = 89.7 bits (98), Expect = 1e-12
Identities = 202/299 (68%), Gaps = 6/299 (2%)
Strand=Plus/Minus
Query 282507 TCGGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCG 282566
|||| ||||||||||| ||| ||||||| || || |||| | || |||| |
Sbjct 180388 TCGGCCATGATCATCAAATGCCCGTATCGGAGGGATTTGTTGTCGGTATATACTTGTTTG 180329
Query 282567 GTTTGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATACTTGCC 282626
| ||||| | || ||| |||| ||||||| ||||| |||| || | |
Sbjct 180328 TGCTTCAGGCCGAGAAATTGCTTGATATTCTGAATTTCTTGATTCTTCATGAT-CTGGTC 180270
Query 282627 -ACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTC 282685
| || |||||||||||||| |||| |||||| ||||| || || |||||| | ||
Sbjct 180269 GATTGAAGCATCGCGAACGTTGAGCATCTTACCTCGGAGGGGGAAGACACCAATGCGATC 180210
Query 282686 GCGACCGACCACGGACAGTCCTGCAATTGC--AAGTGTTGCTGCGGAATCTCCCTCCGTC 282743
| || | | | | | || |||| || || | ||| |||||||| || || |||
Sbjct 180209 GGGATCCAGAATAGCACGACCAGCAACAGCCAAACTCTTG--GCGGAATCACCTTCGGTC 180152
Query 282744 AAGATGAGAGTACACATCTTACTATGATTTGTGCCCGCCCATGCAGCATCGTTTAGTTT 282802
||||| ||||| ||| | || ||| || ||||||||| | ||||||| |||||
Sbjct 180151 AAGATCAGAGTGCACTCATGACCATGCTTGGTGCCCGCCAAGTTAGCATCGACAAGTTT 180093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057817155548150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |