Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq19 163 3e-35 >seq19 Length=350955 Score = 163 bits (180), Expect = 3e-35 Identities = 564/863 (65%), Gaps = 24/863 (3%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 |||||||| | |||||| || ||||| ||||| || ||||| | || || || |||||| Sbjct 190145 TGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCC 190086 Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || ||| | | | || | | | || || | | | | Sbjct 190085 ATGAAGTCGAAGGGGTTGGTGGAGCGGTACACCTTCTCG--TTGCCGAGGGCCACCAGCA 190028 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | || || || || || || || || ||| | | | |||||| |||| || Sbjct 190027 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCTAGTAGG- 189969 Query 16854 GTACCGGA-AGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | || || ||||| ||||||| || ||||| || || || || | || || Sbjct 189968 GCACAGGGCAGAGCCTCCGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATC 189909 Query 16913 CTAGCAAC----TCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968 | | || || || | || |||| |||| | | || |||| ||| || || Sbjct 189908 TTCTCGACCACGTCCTTGCCGGGGCGGT---TGTTGAGG-TGGGAGAACAGCAGGCAGGC 189853 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 ||| ||| || | ||||| || | ||| |||||||| || || |||| ||||| Sbjct 189852 GAAGTCGGTGTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGG 189793 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 ||| || || ||||| | ||| || || | ||||| | ||| ||||| ||||| Sbjct 189792 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACC 189733 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 ||| || | || || || || | |||| |||| | || | | |||| |||||| Sbjct 189732 CTCAACAGCGGCGAAGGCAATAAGACGTTGGGCGAAGGTGGACTTCTTGTCGGCAATCCA 189673 Query 17149 TTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207 | | | |||| ||||| || |||| |||||| || || || ||||| || || | Sbjct 189672 GTGCAGGGCCCAGTCGGCCTTCTTGCGG-ATGCAAGGAATGGTCTCAATGGCATTGAAGA 189614 Query 17208 -ATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 || | |||| | | ||| || | || || || || ||||| ||| ||| | || Sbjct 189613 GATGTGTCTTCTGG--GCAGGCTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAAGTCTC 189556 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325 |||||| ||||||||||| ||||| || ||||| ||||||||||| || | || || Sbjct 189555 GGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCTGGGATCTG 189496 Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385 || || | ||||||| || | || || ||||| || |||||||| |||||||| Sbjct 189495 GACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCAGATGCGGCGAA 189436 Query 17386 AAACGCCAATATATGCTTAATGAAATATTTTTCGTC-CGGTGTA--AGAACGCGCCAGTC 17442 || || | || || ||||| |||| ||||| || || | || |||||| Sbjct 189435 GAAGGCGAGGATGTGGGAGATGAAGAATTTCTCGTCATCGTTTAGGCGGTTGCTCCAGTC 189376 Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502 | | ||| ||||||| ||| | || |||| |||||| || ||| | ||| || Sbjct 189375 GTGGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGTGCTTCTT 189316 Query 17503 ATACATATTCCAAATAT-CATTG 17524 ||||| | ||| || | ||||| Sbjct 189315 GTACATCTGCCAGATCTGCATTG 189293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542332993400