Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq19 163 3e-35
>seq19
Length=350955
Score = 163 bits (180), Expect = 3e-35
Identities = 564/863 (65%), Gaps = 24/863 (3%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
|||||||| | |||||| || ||||| ||||| || ||||| | || || || ||||||
Sbjct 190145 TGGTAATCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCC 190086
Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || ||| | | | || | | | || || | | | |
Sbjct 190085 ATGAAGTCGAAGGGGTTGGTGGAGCGGTACACCTTCTCG--TTGCCGAGGGCCACCAGCA 190028
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| || || || || || || || || ||| | | | |||||| |||| ||
Sbjct 190027 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCTAGTAGG- 189969
Query 16854 GTACCGGA-AGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
| || || ||||| ||||||| || ||||| || || || || | || ||
Sbjct 189968 GCACAGGGCAGAGCCTCCGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATC 189909
Query 16913 CTAGCAAC----TCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968
| | || || || | || |||| |||| | | || |||| ||| || ||
Sbjct 189908 TTCTCGACCACGTCCTTGCCGGGGCGGT---TGTTGAGG-TGGGAGAACAGCAGGCAGGC 189853
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
||| ||| || | ||||| || | ||| |||||||| || || |||| |||||
Sbjct 189852 GAAGTCGGTGTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCGGG 189793
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
||| || || ||||| | ||| || || | ||||| | ||| ||||| |||||
Sbjct 189792 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCACTGAAGAAGATACC 189733
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148
||| || | || || || || | |||| |||| | || | | |||| ||||||
Sbjct 189732 CTCAACAGCGGCGAAGGCAATAAGACGTTGGGCGAAGGTGGACTTCTTGTCGGCAATCCA 189673
Query 17149 TTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207
| | | |||| ||||| || |||| |||||| || || || ||||| || || |
Sbjct 189672 GTGCAGGGCCCAGTCGGCCTTCTTGCGG-ATGCAAGGAATGGTCTCAATGGCATTGAAGA 189614
Query 17208 -ATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265
|| | |||| | | ||| || | || || || || ||||| ||| ||| | ||
Sbjct 189613 GATGTGTCTTCTGG--GCAGGCTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAAGTCTC 189556
Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325
|||||| ||||||||||| ||||| || ||||| ||||||||||| || | || ||
Sbjct 189555 GGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCTGGGATCTG 189496
Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385
|| || | ||||||| || | || || ||||| || |||||||| ||||||||
Sbjct 189495 GACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCAGATGCGGCGAA 189436
Query 17386 AAACGCCAATATATGCTTAATGAAATATTTTTCGTC-CGGTGTA--AGAACGCGCCAGTC 17442
|| || | || || ||||| |||| ||||| || || | || ||||||
Sbjct 189435 GAAGGCGAGGATGTGGGAGATGAAGAATTTCTCGTCATCGTTTAGGCGGTTGCTCCAGTC 189376
Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502
| | ||| ||||||| ||| | || |||| |||||| || ||| | ||| ||
Sbjct 189375 GTGGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGTGCTTCTT 189316
Query 17503 ATACATATTCCAAATAT-CATTG 17524
||||| | ||| || | |||||
Sbjct 189315 GTACATCTGCCAGATCTGCATTG 189293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517542332993400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |