Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq112 109 6e-19 >seq112 Length=148559 Score = 109 bits (120), Expect = 6e-19 Identities = 270/404 (67%), Gaps = 12/404 (3%) Strand=Plus/Minus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||||||||| ||| | | |||||| ||||| || |||| ||||||| ||| Sbjct 93151 ACGTAGAACTGTGCAAAC-ATGTGGCACGGCGGGAGCACCATCTTCTTCAGGTCCTTCGG 93093 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTAT 145985 |||||| |||| |||| | | | || ||| ||||| || | || ||| Sbjct 93092 GTTCCACGCGGAAAGGATCA---TGCGGCGATCGTACGGGTTGTTCCGCAGCTTGTGTAT 93036 Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045 | ||| |||||||| ||||| || ||| |||||||| | || || ||| | Sbjct 93035 GACGTCGGCCAGCTGGTCGTAACCCTGGCCGGTGTAGTCTGTCTTCGCATCGACATACTC 92976 Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105 || ||||| || | ||||||||| ||||| || || |||||||| ||| ||| | || Sbjct 92975 AGCGCCGAAATGGCGCCACTGGAAGCCGTAAACCGGACCCAGGTCGCCGACCTCGCGGTC 92916 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 | ||| || | ||||||| || ||||| || ||| |||||||||||||||| | Sbjct 92915 CGTCAGTCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGACATC 92856 Query 146166 --CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCG 146223 |||| |||| | | ||| ||| ||| ||||||||||| ||||| | Sbjct 92855 TTGTTCGCTAAGAGATGA--GGACGAGGTGTTTCCCTCAATGAACCAGAGTAGCTCGGCA 92798 Query 146224 AGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | ||| | | |||||| | ||| || || || ||||| || Sbjct 92797 ATGACGGCGCGTAGGAAGACGCGCTTCGTCGTTAGGAGGGGTAA 92754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073075140200