Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq112 109 6e-19
>seq112
Length=148559
Score = 109 bits (120), Expect = 6e-19
Identities = 270/404 (67%), Gaps = 12/404 (3%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
||||||||||| ||| | | |||||| ||||| || |||| ||||||| |||
Sbjct 93151 ACGTAGAACTGTGCAAAC-ATGTGGCACGGCGGGAGCACCATCTTCTTCAGGTCCTTCGG 93093
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTAT 145985
|||||| |||| |||| | | | || ||| ||||| || | || |||
Sbjct 93092 GTTCCACGCGGAAAGGATCA---TGCGGCGATCGTACGGGTTGTTCCGCAGCTTGTGTAT 93036
Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045
| ||| |||||||| ||||| || ||| |||||||| | || || ||| |
Sbjct 93035 GACGTCGGCCAGCTGGTCGTAACCCTGGCCGGTGTAGTCTGTCTTCGCATCGACATACTC 92976
Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105
|| ||||| || | ||||||||| ||||| || || |||||||| ||| ||| | ||
Sbjct 92975 AGCGCCGAAATGGCGCCACTGGAAGCCGTAAACCGGACCCAGGTCGCCGACCTCGCGGTC 92916
Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165
| ||| || | ||||||| || ||||| || ||| |||||||||||||||| |
Sbjct 92915 CGTCAGTCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGACATC 92856
Query 146166 --CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCG 146223
|||| |||| | | ||| ||| ||| ||||||||||| ||||| |
Sbjct 92855 TTGTTCGCTAAGAGATGA--GGACGAGGTGTTTCCCTCAATGAACCAGAGTAGCTCGGCA 92798
Query 146224 AGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267
| ||| | | |||||| | ||| || || || ||||| ||
Sbjct 92797 ATGACGGCGCGTAGGAAGACGCGCTTCGTCGTTAGGAGGGGTAA 92754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590073075140200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |