Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq19 351 1e-91 seq87 134 1e-26 seq244 113 5e-20 seq5 109 6e-19 >seq19 Length=350955 Score = 351 bits (388), Expect = 1e-91 Identities = 571/810 (70%), Gaps = 19/810 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| ||| || || |||||||||| ||||||| | || || Sbjct 189301 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTA 189360 Query 116696 TCCAAGGA-CACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| | ||||| ||||| |||||| Sbjct 189361 TCCAAGGATCTCCA-CGACTGGAGCAACCGCCTAAACGATGACGAGAAATTCTTCATCTC 189419 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || ||||| |||||||| |||||||| ||||||||||| || |||||||| Sbjct 189420 CCACATCCTCGCCTTCTTCGCCGCATCTGACGGCATTGTCAACGAGAACCTTGTCGAGCG 189479 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || ||||| ||| | | ||||| || |||||||||||||| |||||| || Sbjct 189480 ATTCTCTGGCGAGGTCCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 189539 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927 ||||||| | ||||| || | || || |||||| ||||| ||| | | || Sbjct 189540 GGAGAACATCCACTCCGAGACTTACTCCCTCCTCATTGACACCTACATCAAGGAGC---- 189595 Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987 | | ||||| | | | || || ||||| ||||| || || ||| || |||||| Sbjct 189596 CTGCCCAGAAGACACATCTCTTCAATGCCATTGAGACCATTCCTTGCATCCGCAAGAAGG 189655 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 |||| ||||| |||| |||||| |||| || || || |||||| | | || || | | Sbjct 189656 CCGACTGGGCCCTGCACTGGATTGCCGACAAGAAGTCCACCTTCGCCCAACGTCTTATTG 189715 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 ||||||| || || ||||| ||||||| || ||||| |||| || ||||||| Sbjct 189716 CCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATCTTCTGGCTCA 189775 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || ||||||||||| ||||| ||| |||||| |||||||| | || |||| Sbjct 189776 AGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCGCGTGATGAGG 189835 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 ||||||| |||||| ||||| |||||||| || | | || || || || Sbjct 189836 GTCTGCACACCGACTTCGCCTGCCTGCTGTTCTCCCACCTCAACAACCGCCCCGGCAAGG 189895 Query 117228 -CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 || | ||| | ||||| ||||||| || ||| |||| |||||| ||||| || || Sbjct 189896 ACGTG-GTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGACGGAG 189954 Query 117287 GCGCTG-CCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344 || ||| || |||| || || || | || || || | ||| ||| |||||||||| Sbjct 189955 GCTCTGCCCTGTGC-CCTACTAGGCATGAA-CGCCAACCTCATGAAGCAGTACATCGAGT 190012 Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404 ||||||||||| | |||||| | | || | | || ||| ||| | | |||||| Sbjct 190013 TCGTCGCCGACCGCCTGCTGGTGGCCCTCGGCAACGAGAAGGTGTACCGCTCCACCAACC 190072 Query 117405 CGCTGGACTTTATGAACCTCATCTCCTTGG 117434 | | ||||| ||| | ||||||| ||| Sbjct 190073 CCTTCGACTTCATGGAGAACATCTCCCTGG 190102 >seq87 Length=177310 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | | | Sbjct 65425 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTAGC 65484 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| || ||| | |||||| Sbjct 65485 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 65544 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||| |||| ||| ||||| || || || |||| || || ||| |||||||||| Sbjct 65545 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACTCTCTCCGACTACAAC 65604 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| ||| || ||||| || Sbjct 65605 ATCCAGAAGGAGAGCACCCTTCATCTCGT 65633 >seq244 Length=60485 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | ||||| || || || ||| | || || ||| | || Sbjct 26416 ATGCAGATTTTTGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCC 26475 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || |||| ||||| || ||||| || |||| || Sbjct 26476 GACACCATCGACAACG-TGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCA 26534 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| ||| || || |||||||| || | |||||| | | ||| ||||| Sbjct 26535 GCAACGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTGAGCGATTACAA 26594 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| ||||||| || Sbjct 26595 TATCCAGAAGGAATCCACGCTCCA 26618 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| || ||||| | || || || | | Sbjct 26188 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACGATCACTCTTGAGGTGGAGTCTTCG 26247 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| || || | ||||| ||||| ||||| | ||||| Sbjct 26248 GACACAATCGACAACG-TCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCA 26306 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| |||| ||||| || ||| |||| || | || || || | ||||||||| Sbjct 26307 ACAACGACTTATCTTTGCGGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAA 26366 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || ||||| || || Sbjct 26367 CATTCAGAAGGAGTCAACTCTGCACCTTGT 26396 Score = 109 bits (120), Expect = 6e-19 Identities = 158/219 (72%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 40682 TCCGAAAA-ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 40740 ||||| || ||||| || ||||| || || ||||| ||||| |||||||| | || ||| Sbjct 25660 TCCGACAAGATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTTGAGGTC 25719 Query 40741 GAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCC 40799 ||| || | || | | | | |||| ||||| || || | ||||| ||||| || || Sbjct 25720 GAATCCTCGGATACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATTCC 25778 Query 40800 CGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAA 40859 | ||||| || ||| | || | ||| || || || || || |||| ||||| || Sbjct 25779 TCCCGACCAACAGCGATTGATTTTCGCTGGAAAGCAACTCGAGGACGGTCGCACTCTTTC 25838 Query 40860 CGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| ||||||||| ||| || || || || Sbjct 25839 CGACTACAACATTCAGAAGGAGAGCACCCTCCACCTTGT 25877 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || || || || || ||||||||| | || ||||| | |||||| | Sbjct 25967 TAGTCGTCAAGACCCTTACCGGAAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCA 26026 Query 40757 TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGAC 40816 | | | | ||| || || | ||||| ||||| || || | |||||||| ||| Sbjct 26027 TCGACAATGTTAAGTCGAAGATCCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGCGAT 26086 Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876 | || | ||| ||||| ||||| || || | || ||||| |||||||||||| |||| Sbjct 26087 TGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGA 26146 Query 40877 AGGAGGCCACGCTGCATCTAGT 40898 |||| | || || || || || Sbjct 26147 AGGAATCGACTCTTCACCTCGT 26168 >seq5 Length=467666 Score = 109 bits (120), Expect = 6e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || || |||||| |||| || || | |||||| | | Sbjct 48475 TTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 48534 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||| ||| | ||||| || || || Sbjct 48535 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAACAGCGTCTG 48594 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| || || || |||| || || || |||||||||||||||||| Sbjct 48595 ATCTTCGCCGGCAAGCAACTTGAGGACGGCCGAACTCTTTCCGACTACAACATCCAGAAA 48654 Query 40879 GAGGCCACGCTGCATCTAGT 40898 ||| |||| || || || || Sbjct 48655 GAGTCCACCCTCCACCTCGT 48674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215947678800