Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq122 295 6e-75
seq19 165 7e-36
seq244 111 1e-19
seq87 86.0 6e-12
>seq122
Length=136518
Score = 295 bits (326), Expect = 6e-75
Identities = 1007/1552 (65%), Gaps = 60/1552 (4%)
Strand=Plus/Plus
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511
|||| || || || |||||||| | | ||| ||||| ||| |||||||| ||| | |
Sbjct 47160 GGTTAACGACCTGGAACTCGCCAGCGAGGACACGGCGAGAGTAGATGTTGGAAGTGTAAG 47219
Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGC-- 22569
| ||||| | |||||||| |||| ||||| | || || || ||||| || ||
Sbjct 47220 GCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTGCTGGCCGTGGGCATGGGGGCGA 47279
Query 22570 -CAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACC 22625
||||| ||| ||| | || || | | |||| ||| ||| ||||| | | ||
Sbjct 47280 CCAACA--AGCT-GTTGCGCACACCATTTTGCTTGA---TTTGCTCCTTGAGGCTGGTCC 47333
Query 22626 AGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCG 22683
||||||| ||||| || || || ||||| |||||| |||||||| | | ||| |||
Sbjct 47334 AGTCCCAAAGATCCGATGGGGTGACATT---CCACATGTCGTATTGAAGGATGCCCTGCG 47390
Query 22684 ACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCT 22743
| || || || ||||| || ||| || || | | | ||||| || |
Sbjct 47391 AGACG--GGAGAACCCTCGTAGGTAGAGTAAGGGCCTTCGACCTTGGCAATCTCCGTGGA 47448
Query 22744 CGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC--- 22800
||| ||| ||| | | || || ||||||||||| | |||||| |||| ||
Sbjct 47449 CGCAGTCAAGGCGGCATGGTAGATCGTCTCGAAGATCTGCTTGTTTAATTGTCTAGCCTC 47508
Query 22801 -GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGC 22859
|| ||| || | |||||||||| || ||| | || || | ||||||||| |
Sbjct 47509 TGGTGAC----TCAAAAGGCATACGCAATGCCAAGAATGTATCAGCAAGACCCTGAACAC 47564
Query 22860 CTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTT----GCCTCGGGCAAAGGATAC 22915
| | ||| || || |||| | || || || || ||||| || | || ||
Sbjct 47565 CAAGACCAATGGGACGGTGTCGCATGTTG----CTGTTACGGGCCTCTGGGACGGGGTAA 47620
Query 22916 CAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTC-ACAATTTTCGTTATNNNNNNNNN 22974
|||| ||| || |||||||||| || || | || | || || |
Sbjct 47621 TAATTGACATCAATAATTCTGTTCAAATTG-TGAACGACGACTTGGGTAACCTCATGCAA 47679
Query 22975 NNNNTCAAAGTCGTAAACGCC--CGATTGTA--CAACAAACTTGTTGACGGCGAT-CGAG 23029
| ||||| ||| ||| || || || ||||||| |||||| | ||||
Sbjct 47680 CTTCTGGAAGTCATAAGTGCCTTCG-TTATAGTCAACAAAG-----GACGGCAACGCGAG 47733
Query 23030 GCAAGAT----TGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACA 23085
| ||| | |||| || |||||||| || || | |||||| | || ||||| ||
Sbjct 47734 GGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTGCA 47793
Query 23086 TAGATT---GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGA 23142
||||| ||| | || || || | ||| ||||||| || || || |||||
Sbjct 47794 AAGATTCGAGCTGCGA---ATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTTGCAGTG 47850
Query 23143 ATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202
||||||||| |||||| | || | || ||||| ||| | ||||| || || |||
Sbjct 47851 ATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCA 47910
Query 23203 CATAGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACA 23261
|| ||||||| | || | || || | | || ||| | |||||||| | |||||
Sbjct 47911 CAGCTTCTGAGCCTTAAT-CTTCTGGCGGCCGCGACCCTCTGCTTCGTACTTCTCGTACA 47969
Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGA 23321
|| || || || | || ||| ||| || || || || | | | ||||||||||
Sbjct 47970 GGGCCTCGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGGACACATGA 48029
Query 23322 GACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGT 23381
| ||||| | | || ||||| ||| |||| || ||||| || ||||| |||||
Sbjct 48030 GGGTCCACTCTCCATTCTTCTCAACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCA 48089
Query 23382 AGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGT 23441
||| || |||||||| || || ||||| ||||| ||||||| | ||| | || |
Sbjct 48090 GGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACT 48149
Query 23442 CCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGC 23501
| || || |||| ||||| ||||||||||| | ||| || || || |||||||| ||||
Sbjct 48150 CGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTGC 48209
Query 23502 CGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGT 23561
| |||||||| ||||| | || ||||| ||| | || | |||||| || || | ||||
Sbjct 48210 CACCCTGATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGT 48269
Query 23562 TGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGA 23621
| || | |||| ||| || | || || | || || | | ||| | || ||
Sbjct 48270 TCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGA 48329
Query 23622 AACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGC 23681
||| || || ||| || || || ||||| || || || || ||||||||||| |
Sbjct 48330 GACCAATACCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATAC 48389
Query 23682 CCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCG 23741
|||| ||||| || || || | |||| | ||| || || || | || || | ||| |
Sbjct 48390 CCTCAATGCTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTG 48449
Query 23742 TAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGT 23801
| | || ||| || || ||| || || || |||||| | ||||| || ||||
Sbjct 48450 TCCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGT 48509
Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCA 23861
| || | ||| | |||| || || || || |||| || || ||||| ||||
Sbjct 48510 AGGTCTGAATGACCTTCTCAACATCGTCGCCCCAGATGCCGACAGCCACACGCATGATCA 48569
Query 23862 TGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCG 23921
| | || |||||||| || | | ||| || || | || || || || | || |
Sbjct 48570 TATGCTGTGGTCTCTCCACGATCTTGTCGTCAAGCTTAAGTAGGTAAGATCGCTCCAAAG 48629
Query 23922 TTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
| || || || || || | ||||| || || | || | || ||||| ||
Sbjct 48630 TCTTGAAGCCGAAGTATTGGTAGTTGAAATCTCTGTCATAGACGATGGCAGA 48681
>seq19
Length=350955
Score = 165 bits (182), Expect = 7e-36
Identities = 483/735 (66%), Gaps = 27/735 (4%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||| ||||| || || ||||||| ||| || | || ||
Sbjct 189301 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTA 189360
Query 57630 TCTAAGGATCTGAGCGATTGGG---ATTCCCTCAAAGAATCTGA-GAGAAATTTT--ATT 57683
|| |||||||| ||| ||| | ||| || || ||| |||||||| | ||
Sbjct 189361 TCCAAGGATCTCCACGACTGGAGCAACCGCCTAAACGA---TGACGAGAAATTCTTCATC 189417
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
||| | | || || ||||||||||| || || ||||| |||||||| | |||||
Sbjct 189418 TCCCACATCCTCGCCTTCTTCGCCGCATCTGACGGCATTGTCAACGAGAACCTTGTCGAG 189477
Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803
|||| || || || || | | ||||| ||||||| ||||| || || |
Sbjct 189478 CGATTCTCTGGCGAGGTCCAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCATG 189537
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863
|| || ||| | || || || | || || || ||||| || || ||| | |||||
Sbjct 189538 ATGGAGAACATCCACTCCGAGACTTACTCCCTCCTCATTGACACCTACATCAAGGAGCCT 189597
Query 57864 GACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922
| | |||| || | || ||||| || || || || || || ||| |||||||||
Sbjct 189598 GCCCAGAAGACACA-TCTCTTCAATGCCATTGAGACCATTCCTTGCATCCGCAAGAAGGC 189656
Query 57923 AGAGTGGTCAATCAAATGGAT----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978
|| ||| | | | ||||| | ||| | | |||| |||||| | | || |
Sbjct 189657 CGACTGGGCCCTGCACTGGATTGCCGACAAG----AAGTCCACCTTCGCCCAACGTCTTA 189712
Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038
| || |||||||| || || ||||| ||||| || ||| || | || || |||
Sbjct 189713 TTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATCTTCTGGC 189772
Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098
| ||||| || || || |||||||| ||||| || |||||| | || ||||| || |
Sbjct 189773 TCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCGCGTGATG 189832
Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158
||||||| || || || || || ||||| ||| ||| ||| |||| ||||| | |
Sbjct 189833 AGGGTCTGCACACCGACTTCGCCTGCCTGCTGTTCTCCCAC---CTCAA-CAACCGCCCC 189888
Query 58159 G----GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214
| ||| || | | || |||||||| || ||| | || || | ||||| |
Sbjct 189889 GGCAAGGACGTGGTCGAGAAGATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTG 189948
Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274
|| || || || || ||| | || || |||||| | | ||| |||||||
Sbjct 189949 ACGGAGGCTCTGCCCTGTGCCCTACTAGGCATGAACGCCAACCTCATGAAGCAGTACATC 190008
Query 58275 GAGTTTGTTGCCGAC 58289
||||| || ||||||
Sbjct 190009 GAGTTCGTCGCCGAC 190023
>seq244
Length=60485
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| || || ||||| |||||||| | || || || | ||
Sbjct 26188 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACGATCACTCTTGAGGTGGAGTCTTCG 26247
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | |||||| | || ||||||||| || | |||||||||||
Sbjct 26248 GACACAATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAA 26307
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| || || || || || || || |||||||| || || ||||||| || |||
Sbjct 26308 CAACGACTTATCTTTGCGGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAAC 26367
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || || ||||| || || || || ||||| | || ||||
Sbjct 26368 ATTCAGAAGGAGTCAACTCTGCACCTTGTTCTCAGACTTCGTGGTGGTA 26416
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || ||||| |||| || || || || ||| | || |||||| | |||
Sbjct 26416 ATGCAGATTTTTGTCAAGACATTGACGGGAAAGACTATTACCCTAGAAGTTGAATCTTCC 26475
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||||||| | || || || |||
Sbjct 26476 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 26535
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || |||||||| || ||| ||||||| | || |||||||||| ||
Sbjct 26536 CAACGTCTCATCTTCGCTGGTAAGCAGCTGGAAGATGGTCGCACCTTGAGCGATTACAAT 26595
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || ||||| || || || |||| ||
Sbjct 26596 ATCCAGAAGGAATCCACGCTCCACTTGGTTCT 26627
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| || || || || || |||||| | || || || ||||||||| |||
Sbjct 25970 TCGTCAAGACCCTTACCGGAAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCG 26029
Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322
| | || || || || |||||||| || | || || ||||||||||| | |
Sbjct 26030 ACAATGTTAAGTCGAAGATCCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATTGA 26089
Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382
| ||||| ||||| ||| | || || || || ||| || |||||||| || |
Sbjct 26090 TTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTGTCCGACTACAACATTCAGAAGG 26149
Query 31383 AATCGACTCTTCATCTGGTACT 31404
||||||||||||| || || ||
Sbjct 26150 AATCGACTCTTCACCTCGTCCT 26171
>seq87
Length=177310
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
||| |||||| || ||||| ||||| || || ||||| || |||||| | || || ||
Sbjct 65420 CAATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGT 65479
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| ||||| |||| | ||||| | || ||||||||| || | || ||||
Sbjct 65480 CTAGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCCG 65539
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||||||||| || || ||||| ||||| || | |||||| ||| | ||| |
Sbjct 65540 ACCAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACTCTCTCCGACT 65599
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
| ||||| || || || || |||||||| || ||
Sbjct 65600 ACAACATCCAGAAGGAGAGCACCCTTCATCTCGTCCT 65636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445763586099600
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