Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq122 93.3 8e-14 >seq122 Length=136518 Score = 93.3 bits (102), Expect = 8e-14 Identities = 116/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458 || || || || || |||||||||| |||| ||||| ||||||| ||||| | || Sbjct 47945 CCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGA 48004 Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCC 94515 ||||||||||||| || ||||| |||| ||| || ||| |||| || | | | Sbjct 48005 CCAGGGCACTCGTTAGGACACATGAGGGTCCA---CTCTCCATTCTTCTCAACACGTTTC 48061 Query 94516 ATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 ||||||||||||| | ||||| ||| |||| ||||| Sbjct 48062 ATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATC 48099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577597082275