Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq122 93.3 8e-14
>seq122
Length=136518
Score = 93.3 bits (102), Expect = 8e-14
Identities = 116/158 (73%), Gaps = 6/158 (4%)
Strand=Plus/Plus
Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458
|| || || || || |||||||||| |||| ||||| ||||||| ||||| | ||
Sbjct 47945 CCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCATAAACGTCAGCTAGA 48004
Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCC 94515
||||||||||||| || ||||| |||| ||| || ||| |||| || | | |
Sbjct 48005 CCAGGGCACTCGTTAGGACACATGAGGGTCCA---CTCTCCATTCTTCTCAACACGTTTC 48061
Query 94516 ATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553
||||||||||||| | ||||| ||| |||| |||||
Sbjct 48062 ATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATC 48099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989577597082275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |