Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq122 206 4e-48
seq19 127 3e-24
>seq122
Length=136518
Score = 206 bits (228), Expect = 4e-48
Identities = 732/1133 (65%), Gaps = 18/1133 (2%)
Strand=Plus/Plus
Query 65751 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 65810
|| || || || ||||||| || | | || | || ||||| |||||||||||
Sbjct 47744 TTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAG 47803
Query 65811 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 65870
| || || || | ||| | || |||||||| ||| || |||||| |||||
Sbjct 47804 CTGCGAATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGC 47863
Query 65871 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGC 65929
||||| ||| | ||||| ||| |||||| || | ||| || | ||| | | || ||||
Sbjct 47864 ATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACA-GCTTCTGAGC 47922
Query 65930 CTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 65989
||| || | | | ||| |||||| |||| ||||||||
Sbjct 47923 CTTAATCTTCTGGCGGCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCGAACTC 47982
Query 65990 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 66049
|| || |||| | | | ||||| || || | |||||||| | | |||||||||
Sbjct 47983 ATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGGACACATGAGGGTCCACTCTCC 48042
Query 66050 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCT 66109
| | || || |||||||| ||||||||||||||||| ||||| | || | ||| |
Sbjct 48043 ATTCTTCTCAACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGATCGCG 48102
Query 66110 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATA 66169
|| | | |||||| || || |||||| |||||| |||||| | | || ||| |
Sbjct 48103 GGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCGAAAACATCCGA 48162
Query 66170 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 66229
||||| || || | ||| ||||| | | | ||||| | ||||| || ||||||||||
Sbjct 48163 GTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTGCCACCCTGATCTAC 48222
Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289
|||||| || |||||||| | || | | ||| || | ||| || || || || || ||
Sbjct 48223 GTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGGTGCCGTT 48282
Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCC 66349
|| || | || || ||| | ||||| || || ||||| || || ||
Sbjct 48283 AGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGAGACCAATACCACC 48342
Query 66350 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 66409
||||| || ||||| | || || || | || || ||||| ||||| || |||||
Sbjct 48343 GGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATGCTATC 48402
Query 66410 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 66469
||| |||||| | || || || || | ||| | || || ||||| ||
Sbjct 48403 GTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGTCCCAGCATTGAA 48462
Query 66470 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 66529
| || || ||||| || || || |||| ||| | || ||||| |||| ||| |
Sbjct 48463 GAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGTAGGTCTGAATGAC 48522
Query 66530 TGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 66585
|| | ||| || |||| || || || |||||||| | ||| ||||| |
Sbjct 48523 CTTCTCAACATCGTCGCCCCAGATG----CCGACAGCCACACGCATGATCATATGCTGTG 48578
Query 66586 GTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAAC 66645
|||| || |||||||||| || | || | | ||| ||| |||||||| || || |
Sbjct 48579 GTCTCTCCACGATCTTGTCGTCAAGCTTAAGTAGGTAAGATCGCTCCAAAGTCTTGAAGC 48638
Query 66646 CAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703
| || || | ||| ||||| |||| || || | || | |||| | | |||||
Sbjct 48639 CGAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACGATGGCAGAGTCAAAGTCTTCCTT 48696
Query 66704 ATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTT 66762
|| | | | || ||| | | | ||| ||||| || ||||| | ||| || |
Sbjct 48697 ATGTCTCATGAC-ACACTCGTATGTCTCCTTAGAAATCATAGGAGATGGCTTCTTGTTCT 48755
Query 66763 TAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCT 66821
| || |||||||||| | | | || | || || | || | || || || |
Sbjct 48756 TTGGGTTGACATAGTGGTAGAGGTCGCTGACGAC-AGACGACCATTGCTTCTTCGTCTGC 48814
Query 66822 TTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
|||||||| ||||| ||||| || | ||||| | |||||||| || || ||
Sbjct 48815 TTGTGTAGGTTTGACACGGCAATACGTGCGGCAAGGATGGCATAGTCTGGGTG 48867
>seq19
Length=350955
Score = 127 bits (140), Expect = 3e-24
Identities = 373/569 (66%), Gaps = 12/569 (2%)
Strand=Plus/Minus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| || || ||||| ||| ||| |||||||| || | || | |||||||||
Sbjct 189866 AACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAG 189807
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| || || |||||||| || |||||||| || ||||| || ||||| || || | ||||
Sbjct 189806 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCA 189747
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328
||||| || || || || || || ||||||||||| | | | || | |||
Sbjct 189746 CTGAAGAAGATACCCTCAACAGCGGCGAAGGCAATAAGACGTTGGGC-GAAGGTGGACT- 189689
Query 36329 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 36383
|| ||| ||||| | | ||||| ||||||||||| | ||||| || ||||
Sbjct 189688 TCTTGTCGGCAATCCAGTGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCT 189629
Query 36384 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443
| || ||||| ||||||| | || | | || || | || || ||||| | |
Sbjct 189628 CAATGGCATTGAAGAGATGTGTCTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGA 189569
Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503
| || | || || || ||||| || || || || || |||||||| |||| |
Sbjct 189568 GGGAGTAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGG 189509
Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 36563
|||| | ||||| || || | | ||||| || | | || || || || || ||||
Sbjct 189508 CCTCTGGGATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGT 189449
Query 36564 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-TTGGTGTTA-- 36620
|| || || || || || | | || || || |||| |||| | || |||
Sbjct 189448 CAGATGCGGCGAAGAAGGCGAGGATGTGGGAGATGAAGAATTTCTCGTCATCGT-TTAGG 189390
Query 36621 -GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 36679
| || |||| || | || ||| || |||| ||| | || || | ||||| || ||
Sbjct 189389 CGGTTGCTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCAGAAGGAA 189330
Query 36680 GCCTCTGCCTTTTTATACATATTCCAGAT 36708
|| || ||| || ||||| | ||||||
Sbjct 189329 GCTTCGTGCTTCTTGTACATCTGCCAGAT 189301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658168645284200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |