Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq112 87.8 2e-12
>seq112
Length=148559
Score = 87.8 bits (96), Expect = 2e-12
Identities = 131/183 (72%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 20913 AGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCA--AGGTGT 20970
||||||| | |||| || ||||||| | || || ||||| ||||||| | ||||
Sbjct 93394 AGCTGAACCTTTAGGGCGTCGACGTGGTCGACATATACATGGGCATCACCCATTACGTGT 93335
Query 20971 GCACAAAGTCTCCCGGGGTCAGGCCCGTG-ACGTGAGCGATCAGATACGTCAGGAGGGCG 21029
| || || || || | | || || || |||| || || |||||| || |||
Sbjct 93334 GTC---AGGCTTCCTGGCACGAGATCGCATACATGCGCGAGCATATGCGTCAGCAGCGCG 93278
Query 21030 TAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGG 21089
|| || ||||| |||||||| || ||||||||||||||| ||||| ||||| | ||||
Sbjct 93277 TAACTTGCGATATTAAACGGAACACCGAGGCCCATGTCGCAGGACCGTTGGTATAACTGG 93218
Query 21090 CAG 21092
|||
Sbjct 93217 CAG 93215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427773367172400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |