Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq112 87.8 2e-12 >seq112 Length=148559 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/183 (72%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 20913 AGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCA--AGGTGT 20970 ||||||| | |||| || ||||||| | || || ||||| ||||||| | |||| Sbjct 93394 AGCTGAACCTTTAGGGCGTCGACGTGGTCGACATATACATGGGCATCACCCATTACGTGT 93335 Query 20971 GCACAAAGTCTCCCGGGGTCAGGCCCGTG-ACGTGAGCGATCAGATACGTCAGGAGGGCG 21029 | || || || || | | || || || |||| || || |||||| || ||| Sbjct 93334 GTC---AGGCTTCCTGGCACGAGATCGCATACATGCGCGAGCATATGCGTCAGCAGCGCG 93278 Query 21030 TAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGG 21089 || || ||||| |||||||| || ||||||||||||||| ||||| ||||| | |||| Sbjct 93277 TAACTTGCGATATTAAACGGAACACCGAGGCCCATGTCGCAGGACCGTTGGTATAACTGG 93218 Query 21090 CAG 21092 ||| Sbjct 93217 CAG 93215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427773367172400