Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq122 246 4e-60
seq19 127 3e-24
>seq122
Length=136518
Score = 246 bits (272), Expect = 4e-60
Identities = 759/1157 (66%), Gaps = 28/1157 (2%)
Strand=Plus/Plus
Query 79611 CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 79670
|||||||| || || | || || || || ||||||| || | | || | || ||
Sbjct 47725 CAACGCGAGGGAAGCTAAGTTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGAT 47784
Query 79671 TTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 79730
|| ||||| || || | ||| || || | ||| | || |||||||| |||
Sbjct 47785 CTCGGTGCAAAGATTCGAGCTGCGAATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTT 47844
Query 79731 ACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 79790
|| |||||| ||||| ||||| ||| | ||||| ||| |||||| || | ||| ||
Sbjct 47845 GCAGTGATCCTTGTAAAGCATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGC 47904
Query 79791 TTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCT--TTCGTA-T 79845
| ||| | | || ||||||| || | || | | | |||| |||||| |
Sbjct 47905 GTACCACA-GCTTCTGAGCCTTAATCTT---CTGGCGGCCGCGACCCTCTGCTTCGTACT 47960
Query 79846 TGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTC 79904
| | ||| | | |||||||| || || |||| || ||| ||||| || ||||
Sbjct 47961 TCTCGTACAGGGCC--TCGAACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTT 48018
Query 79905 AGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAAT 79964
||||||||| | | ||||||||||| | || || |||||||| ||||||||||||||
Sbjct 48019 AGGACACATGAGGGTCCACTCTCCATTCTTCTCAACACGTTTCATGAAGAGATCAGGAAT 48078
Query 79965 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 80024
||| ||||| | || ||||| | || | | ||||| || || |||||| |||
Sbjct 48079 CCAGAGAGCCAGGAAGAGATCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAG 48138
Query 80025 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 80084
||| |||||| | | || ||| || ||||| || || | ||| ||||| | | | || ||
Sbjct 48139 ATCAAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGG 48198
Query 80085 TCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 80144
|| ||||| || |||||||||| |||||| || |||||||| | || | | ||| ||
Sbjct 48199 TCTCTTGTTGCCACCCTGATCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGG 48258
Query 80145 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 80204
| ||| || || || || || || || || | || || ||| | ||||| ||
Sbjct 48259 TACAATGCCGTTCGAGGTGCCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCG 48318
Query 80205 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 80264
|| ||||| || || || ||||| || ||||| | || || || | ||
Sbjct 48319 GTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGT 48378
Query 80265 ATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTG 80324
|| ||||| ||||| |||||||| || |||||| | || || || || | ||
Sbjct 48379 GTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCTG 48438
Query 80325 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 80384
| | || || ||||| || | || || ||||| || || || |||| |||
Sbjct 48439 GGCCTGGGGTGTCCCAGCATTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGA 48498
Query 80385 CAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATGAATTCCTACCG 80440
|| || ||||| |||| ||| | || | ||| || |||| || || |
Sbjct 48499 CATGAGGTTGTAGGTCTGAATGACCTTCTCAACATCGTCGCCCCAGATG----CCGACAG 48554
Query 80441 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGT 80500
| |||||||| | ||| ||||| ||||| || |||||||||| | | || | | ||
Sbjct 48555 CCACACGCATGATCATATGCTGTGGTCTCTCCACGATCTTGTCGTCAAGCTTAAGTAGGT 48614
Query 80501 AAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAAT 80558
||||| |||||||| || || || || || | ||| ||||| |||| || || |
Sbjct 48615 AAGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAA--TCTCTGTCATAGAC 48672
Query 80559 AATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAA 80617
|| | |||| | | ||||||| | | | || ||| | | | ||| ||||
Sbjct 48673 GATGGCAGAGTCAAAGTCTTCCTTATGTCTCATGAC-ACACTCGTATGTCTCCTTAGAAA 48731
Query 80618 TAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTT 80677
| || ||||| | ||| || || || || ||||||| | | | || | ||
Sbjct 48732 TCATAGGAGATGGCTTCTTGTTCTTTGGGTTGACATAGTGGTAGAGGTCGCTGACGAC-A 48790
Query 80678 CACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAA 80736
|| | || | || || || | ||||||||| ||||| ||||| || | ||||| |
Sbjct 48791 GACGACCATTGCTTCTTCGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCGGCAAGG 48850
Query 80737 ATGGCATAATCTGGATG 80753
|||||||| ||||| ||
Sbjct 48851 ATGGCATAGTCTGGGTG 48867
>seq19
Length=350955
Score = 127 bits (140), Expect = 3e-24
Identities = 283/422 (67%), Gaps = 7/422 (2%)
Strand=Plus/Minus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || || ||||| ||| |||||||||||| || | || |||||||||||
Sbjct 189866 AACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAG 189807
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| || || |||||||| || |||||||| || ||||| || ||||| || || | |||
Sbjct 189806 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCA 189747
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130
|||||||| || || || ||||| ||||||| ||| | | | | ||| ||
Sbjct 189746 CTGAAGAAGATACCCTCAACAGCGGCGAAGGCAATAAGACGTTGGGCGAAGGTGG-ACT- 189689
Query 50131 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185
|| ||| ||||| | | ||||| ||||||||||| | ||||| || || |
Sbjct 189688 TCTTGTCGGCAATCCAGTGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCT 189629
Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245
| |||||||| ||||||| | || | | || || | || || || || | |
Sbjct 189628 CAATGGCATTGAAGAGATGTGTCTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGA 189569
Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305
| || | || || || ||||| || || ||||| || |||||||| |||| |
Sbjct 189568 GGGAGTAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGG 189509
Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365
|||| | ||||| || || | | ||||| || | | || || || || || ||||
Sbjct 189508 CCTCTGGGATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGT 189449
Query 50366 CA 50367
||
Sbjct 189448 CA 189447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718264265928200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |