Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq122 221 2e-52
seq19 141 1e-28
>seq122
Length=136518
Score = 221 bits (244), Expect = 2e-52
Identities = 742/1138 (65%), Gaps = 28/1138 (2%)
Strand=Plus/Plus
Query 71713 TTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTA 71772
|| || || || ||||||| || ||| || | || || || |||||||||||
Sbjct 47744 TTGCAGACAGCCACCTCATCAGGGGCGGAGTACTCAATGATCTCGGTGCAAAGATTCGAG 47803
Query 71773 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 71832
| || || || | ||| | || |||||||| ||| || |||||| |||||
Sbjct 47804 CTGCGAATAGTACCAAGATTCTTCTGGTTACTCTTGCGGTTGCAGTGATCCTTGTAAAGC 47863
Query 71833 ATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGC 71891
|| || ||| | ||||| ||| |||||| || | ||| || | ||| | | || ||||
Sbjct 47864 ATGAAGGGATTTCCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCACA-GCTTCTGAGC 47922
Query 71892 CTTTATTATATTCTTGTATCT-CTTTTCTCT--TTCGTA-TTGT-GTATATAATCGTTCG 71946
||| || |||| | | | |||| |||||| || | ||| | | |||
Sbjct 47923 CTTAATC---TTCTGGCGGCCGCGACCCTCTGCTTCGTACTTCTCGTACAGGGCC--TCG 47977
Query 71947 AACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCAC 72006
||||| || || || | | ||| ||||| || || || |||||||| | | ||||
Sbjct 47978 AACTCATCGCCATAAACGTCAGCTAGACCAGGGCACTCGTTAGGACACATGAGGGTCCAC 48037
Query 72007 TCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 72066
||||||| | | || |||||||| ||||||||||||||||| ||||| | || |||
Sbjct 48038 TCTCCATTCTTCTCAACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCCAGGAAGAGA 48097
Query 72067 TCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 72126
|| | || | | ||||| || || |||||| |||||| |||||| | | || |
Sbjct 48098 TCGCGGGCACGAACTTCCTCCTTGCCATGGTTCTTTCGAAGATCAAGGAACTCGAAAACA 48157
Query 72127 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGA 72186
|| || ||||| || || | ||| ||||| | | | || || | ||||| || ||||||
Sbjct 48158 TCCGAGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCAGGTCTCTTGTTGCCACCCTGA 48217
Query 72187 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCA 72246
|||| |||||| || |||||||| | || | | ||| || | ||| || || || |
Sbjct 48218 TCTACGTATCTTGCAGTGTTATTGAAGACACGTAGCATGGGTACAATGCCGTTCGAGGTG 48277
Query 72247 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATT 72306
|| || || || | || || ||| | ||||| || | || ||||| ||
Sbjct 48278 CCGTTAGTGCCAGCAATGTATGAGCCAGTAGCACGGATGCGGTGGATGTTGAGACCAATA 48337
Query 72307 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 72366
|| || ||||| || ||||| | || || || | || || ||||| ||||| ||
Sbjct 48338 CCACCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCCTCAATG 48397
Query 72367 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 72426
||||| ||| |||||| | || || || || | ||| | || || |||
Sbjct 48398 CTATCGTCCTTCATGTCGACGAGGAAGCAAGACGAGAGCTGGGCCTGGGGTGTCCCAGCA 48457
Query 72427 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 72486
|| || | || || ||||| || || || |||| ||||| || ||||| |||| |
Sbjct 48458 TTGAAGAGAGTTGGGGAAGCATGAGTGAAGTATTTGCTAGACATGAGGTTGTAGGTCTGA 48517
Query 72487 ATAGCTGATTCTATATC----CCATTGATGTATTCCTACCGCGACACGCATTAACATATG 72542
|| | || | ||| || |||| || || || |||||||| | ||||||
Sbjct 48518 ATGACCTTCTCAACATCGTCGCCCCAGATG----CCGACAGCCACACGCATGATCATATG 48573
Query 72543 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 72602
||| ||||| || |||||||||| | | || | | ||| ||| |||||||| ||
Sbjct 48574 CTGTGGTCTCTCCACGATCTTGTCGTCAAGCTTAAGTAGGTAAGATCGCTCCAAAGTCTT 48633
Query 72603 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTA 72660
|| || || || | ||| ||||| |||| || || | || | || | | |
Sbjct 48634 GAAGCCGAAGTATTGGTAGTTGAAA--TCTCTGTCATAGACGATGGCAGAGTCAAAGTCT 48691
Query 72661 TCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCC 72719
||||||| | | | || | | | | | ||| ||||| || ||||| | |||
Sbjct 48692 TCCTTATGTCTCATGAC-ACACTCGTATGTCTCCTTAGAAATCATAGGAGATGGCTTCTT 48750
Query 72720 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttG 72778
|| || || || ||||||| | | | || | || || | || | || || |
Sbjct 48751 GTTCTTTGGGTTGACATAGTGGTAGAGGTCGCTGACGAC-AGACGACCATTGCTTCTTCG 48809
Query 72779 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
| | ||||||||| ||||| ||||| || | ||||| || |||||||| ||||| ||
Sbjct 48810 TCTGCTTGTGTAGGTTTGACACGGCAATACGTGCGGCAAGGATGGCATAGTCTGGGTG 48867
>seq19
Length=350955
Score = 141 bits (156), Expect = 1e-28
Identities = 374/568 (66%), Gaps = 10/568 (2%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || || ||||| ||| ||||||||||||||| | || | |||||||||
Sbjct 189866 AACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGCGAGATGAGTTCGTTGGAG 189807
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| || || |||||||| || |||||||| || ||||| || || || || || | ||||
Sbjct 189806 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGCTCCA 189747
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235
|||||||| || || || || || ||||||||||| | | | || | |||
Sbjct 189746 CTGAAGAAGATACCCTCAACAGCGGCGAAGGCAATAAGACGTTGGGC-GAAGGTGGACT- 189689
Query 42236 TCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290
|| ||| ||||| | | ||||| ||||||||||| | ||||| || || |
Sbjct 189688 TCTTGTCGGCAATCCAGTGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAAGGAATGGTCT 189629
Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350
| |||||||| ||||||| | || | | || || | || || || || | |
Sbjct 189628 CAATGGCATTGAAGAGATGTGTCTTCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGGA 189569
Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410
| || | || || || ||||| || || ||||| || |||||||| |||| ||
Sbjct 189568 GGGAGTAAGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGG 189509
Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470
|||| | | ||| || || | | ||||| || | | || ||||| || || ||||
Sbjct 189508 CCTCTGGGATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGT 189449
Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTA--- 42527
|| || || || || || | | || || || |||| ||||| |||
Sbjct 189448 CAGATGCGGCGAAGAAGGCGAGGATGTGGGAGATGAAGAATTTCTCGTCATCGTTTAGGC 189389
Query 42528 ATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATG 42587
|| |||| || | || ||| || |||| ||| | || || | ||||| || || |
Sbjct 189388 GGTTGCTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCGGTCCAGAAGGAAG 189329
Query 42588 CTTCTGCCTTTTTATACATATTCCAGAT 42615
|||| ||| || ||||| | ||||||
Sbjct 189328 CTTCGTGCTTCTTGTACATCTGCCAGAT 189301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671134963433800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |