Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq244 120 7e-22
seq5 118 2e-21
>seq244
Length=60485
Score = 120 bits (132), Expect = 7e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| ||||| || || | || | ||| ||||| || || || |||
Sbjct 26612 GTGGATTCCTTCTGGATATTGTAATCGCTCAAGGTGCGACCATCTTCCAGCTGCTTACCA 26553
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | || ||||| ||||| || ||||| || ||||||||||| ||| ||
Sbjct 26552 GCGAAGATGAGACGTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGAATCTT-GCTCTT 26494
Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| ||| || ||| || ||||| ||||||||||| || || | |||
Sbjct 26493 CACGTTGTCGATGGTGTCGGAAGATTCAACTTCTAGGGTAATAGTCTTTCCCGTCAATGT 26434
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 26433 CTTGACAAAAATCTGCAT 26416
>seq5
Length=467666
Score = 118 bits (130), Expect = 2e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || |||||||| || || ||||| || ||||||| ||||| || ||||| || ||
Sbjct 48662 GTGGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCAAGTTGCTTGCCG 48603
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | |||||| || || || || || || || ||||| ||||| | ||
Sbjct 48602 GCGAAGATCAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 48543
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| || || ||||| || || ||||||||||| ||||| ||
Sbjct 48542 ACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTAAGGGTC 48483
Query 104543 TTTACAAA 104550
|| || ||
Sbjct 48482 TTCACGAA 48475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151390950092540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |