Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 >seq1 Length=578297 Score = 111 bits (122), Expect = 1e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 5590 GATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAA 5649 ||||| |||||| | || |||||| | ||| ||| || | | | | |||||| Sbjct 355803 GATCAACTGCGCAACGCGATCGCCCACCGCAACCGGGAACTCCGTCTCGGAGTGGTTGAA 355744 Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709 ||||| ||| ||| ||| || ||||| ||||| || ||||| |||||| |||||| Sbjct 355743 CAGCAGCACCTTGACGGGGCCCCGATAGTCCGCGTCGATGACGCCGGCGCCCGTGTCGAT 355684 Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAG 5755 |||||||||| ||| |||||||||||||| || ||||| |||||| Sbjct 355683 GAAGTGCTTGGACGCGAGGCCGGAGCGGGGCGCTACGCGCCCGTAG 355638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430051753149560