Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq244 95.1 1e-14
>seq244
Length=60485
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| || || ||||| | || || |||| || || || ||||||||||| || |||
Sbjct 25823 TCCTCGAGTTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCGGGAGGAATACCCTCCTTG 25764
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||||||| | ||| || || | | ||||| |||| ||||||
Sbjct 25763 TCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATG 25704
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| ||||| || || |||||||||||
Sbjct 25703 GTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 25669
Score = 89.7 bits (98), Expect = 5e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| |||||||| || | ||| || ||| || || | |||||| |||||
Sbjct 26163 GTGAAGAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGGGTTCGGCCATCCTCAAGCTG 26104
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| ||| | || || |||| ||||| || ||||||||||| || ||||| | || ||
Sbjct 26103 CTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTGGATCTT 26044
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
| ||| || | ||| ||||| | ||||| |||| |||||||| ||||| ||
Sbjct 26043 CGACTTAACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTTCCGGT 25984
Query 94984 AAGAGTTTTCAC 94995
||| || || ||
Sbjct 25983 AAGGGTCTTGAC 25972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448288370161800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |