Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq18 111 2e-20
seq198 104 4e-18
>seq18
Length=356566
Score = 111 bits (122), Expect = 2e-20
Identities = 86/100 (86%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||||||| |||||| | || || |||||||| || ||||| ||||| ||||
Sbjct 43667 CGCCAAGCGTCATCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACAAAGCCCGCTA 43725
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
|||| ||||| |||||||||||||| ||||||||| ||||
Sbjct 43726 TCCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 43765
>seq198
Length=84462
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 55847 GCCAAGCGCCACCGTAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 55789
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 55788 TCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 55748
Score = 84.2 bits (92), Expect = 3e-12
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| || | ||| | ||| ||||||| || || || | |||||
Sbjct 55688 TGATCTACGAAGAGACCCGAGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCATTCGTGATG 55629
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||| ||| | || ||||||| |
Sbjct 55628 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACTTCCCTCGACGTCGTCTACG 55569
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| |||| || || ||||| | | || ||||| || |||||
Sbjct 55568 CTCTGAAGCGACAGGGCCGCACCCTGTACGGTTTCGGTGGTTAA 55525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074738274965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |