Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq122 396 7e-105
seq19 91.5 4e-13
>seq122
Length=136518
Score = 396 bits (438), Expect = 7e-105
Identities = 1014/1528 (66%), Gaps = 28/1528 (2%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || || | ||||| | | ||||||||| || | | | ||| | || |||
Sbjct 48486 TTCACTCATGCTTCCCCAACTCTCTTCAATGCTGGGACACCCCAGGCCCAGCTCTCGTCT 48427
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | |||||||||||| ||| |||||||||| ||||| || |||| |
Sbjct 48426 TGCTTCCTCGTCGACATGAAGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACT 48367
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725
||||| | || ||||||| || || || |||||| | |||||| | |||||
Sbjct 48366 TGTGCCATGATCTCCAAGATGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCT 48307
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785
|| | | |||||| ||||| || |||||| || | || |||||||| ||
Sbjct 48306 ACTGG-CTCATACATTGCTGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACG 48248
Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845
||| || | || ||||| || ||||| || |||||||| ||| | || || ||
Sbjct 48247 TGTCTTCAATAACACTGCAAGATACGTAGATCAGGGTGGCAACAAGAGACCTGGTGCTTT 48188
Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905
|| || || ||||||||| || | ||| |||| ||||| ||||| || || || ||
Sbjct 48187 CGCCATCTACCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAA 48128
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
| || || |||||| | ||||| || ||||| ||| || || ||| || |||| |
Sbjct 48127 CCATGGCAAGGAGGAAGTTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCT 48068
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTC 364024
|| ||||| || || ||| || || | ||| | ||| | || || |||| || |
Sbjct 48067 CTTCATGAAACGTGTTGAGA-AGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCC 48009
Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084
| ||||| | || || | || || || | | || || ||||| ||||| ||| | |
Sbjct 48008 CTGGTCTAGCTGACGTTTATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAG 47949
Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144
|||| | || ||| ||| || |||||||| |||| ||||| | || | |
Sbjct 47948 AGGGTCGCGGCCGCCAGAAGATTAAGGCTCAGAAGCTGTGGTACGCCATTCTCGAGGCTC 47889
Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204
||| |||||| |||| |||| ||| | ||||| ||| |||||||||||| ||||
Sbjct 47888 AGACTGAGACTGGAAATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAACC 47829
Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACC 364263
|| || | |||||||| |||| |||| | || || || |||||||| ||||| ||| ||
Sbjct 47828 AGAAGAATCTTGGTACTATTC-GCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCC 47770
Query 364264 GCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---- 364319
|| || || ||| || || || ||| | || || ||||| | ||| | |||||
Sbjct 47769 GCCCCTGATGAGGTGGCTGTCTGCAACTTAGCTTCCCTCGCGTTGCCGTCCTTTGTTGAC 47710
Query 364320 --AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTT 364375
|| || || |||| |||| |||| | | |||| || ||| | || | | |
Sbjct 47709 TATAACGAAGGCACTTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGT--TC 47652
Query 364376 GCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGT---T 364432
|||| | ||| |||| || |||||||| || | || || ||| |||
Sbjct 47651 ACAATTTGAACAGAATTATTGATGTCAATTATTACCCCGTCCCAGAGGCC---CGTAACA 47595
Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTG--ACGTTTTTAT 364490
|| ||||| || || || |||||||||||||| ||||| || |||| || || ||
Sbjct 47594 GCAACATGCGACACCGTCCCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCTTGG 47535
Query 364491 GATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGA 364550
|| | ||| | ||||| || || || ||| | |||| ||| ||||||| ||
Sbjct 47534 CAT--TGCGTATGCCTTTTGAGTCACCAGAGGCTAGACAATTAAACAAGCAGATCTTCGA 47477
Query 364551 AACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTA 364610
|| || || |||||| ||||||| || || | || || | | || ||
Sbjct 47476 GACGATCTACCATGCCGCCTTGACTGCGTCCACGGAGATTGCCAAGGTCGAAGGCCCTTA 47417
Query 364611 CTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGT 364670
|||||| || ||||| || || | |||||||| | | || | || | ||||||||
Sbjct 47416 CTCTACCTACGAGGGTTCTCCCGTCTCGCAGGGCATCCTTCAATACGACATGTGGAATGT 47357
Query 364671 CACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTA 364729
||| ||||| | | ||| ||||| | || | | ||| | ||| | |||||
Sbjct 47356 CACCCCATCGGATCTTTGGGACTGGACCAGCCTCAAGGAGCAA-ATCAAGCAAAATGGTG 47298
Query 364730 CTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789
|||||| | | | || |||||||||||||| || | |||||| | || |
Sbjct 47297 TGCGCAACAGCTTGTTGGTCGCCCCCATGCCCACGGCCAGCACATCCCAGATCTTGGGTA 47238
Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAG 364849
|||| ||||||||||| || | || ||| | || || ||||| || || | || |
Sbjct 47237 ACAATGAGTGCTTCGAGCCTTACACTTCCAACATCTACTCTCGCCGTGTCCTCGCTGGCG 47178
Query 364850 AATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTG 364909
| || | ||| ||||| | | ||||||| ||| ||| || || ||| ||
Sbjct 47177 AGTTCCAGGTCGTTAACCCCTGGTTGCTCAAGGACCTTGTTGACATGGGTCTCTGGTCTG 47118
Query 364910 ACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTC 364969
| |||||||||||| |||||| |||| ||||| | |||||||| || |||
Sbjct 47117 ATAGCATGAAGAACCGTATCATTGCCGAGGGCGGTTCAATTCAGAACATCCCCAACATTC 47058
Query 364970 CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG 365029
| | ||| | ||| || ||||||| ||||| |||||||| ||| ||||| | |
Sbjct 47057 CTGCTGATATCAAGGCTCTTTACAAGACCGTCTGGGAAATATCCCAACGAACCGTTGTCC 46998
Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTAT 365057
| ||||| || || || ||||| || ||
Sbjct 46997 AGATGGCCGCTGACCGTGGTGCGTTCAT 46970
>seq19
Length=350955
Score = 91.5 bits (100), Expect = 4e-13
Identities = 153/217 (71%), Gaps = 7/217 (3%)
Strand=Plus/Plus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCA--TTCGCGGAAC 22492
|| ||||| || ||||| ||| | ||||| |||| ||| || || ||||| |||
Sbjct 189649 AAGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAA-GAA-GTCCACCTTCGCCCAAC 189706
Query 22493 GTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCT 22552
|||||||||| || || | ||||| || || ||||| |||||| || | | ||||
Sbjct 189707 GTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATCT 189766
Query 22553 TTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCC 22612
| ||||| || || |||| | ||||| ||||| || || || || || | || |
Sbjct 189767 TCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCGC 189826
Query 22613 GAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649
| ||||||||||| || ||||| || || || ||||
Sbjct 189827 GTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGCT 189863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303345166894910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |