Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq122 396 7e-105 seq19 91.5 4e-13 >seq122 Length=136518 Score = 396 bits (438), Expect = 7e-105 Identities = 1014/1528 (66%), Gaps = 28/1528 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || || | ||||| | | ||||||||| || | | | ||| | || ||| Sbjct 48486 TTCACTCATGCTTCCCCAACTCTCTTCAATGCTGGGACACCCCAGGCCCAGCTCTCGTCT 48427 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||||||| ||| |||||||||| ||||| || |||| | Sbjct 48426 TGCTTCCTCGTCGACATGAAGGACGATAGCATTGAGGGTATCTACGACACCCTCAAGACT 48367 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 ||||| | || ||||||| || || || |||||| | |||||| | ||||| Sbjct 48366 TGTGCCATGATCTCCAAGATGGCCGGTGGTATTGGTCTCAACATCCACCGCATCCGTGCT 48307 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | |||||| ||||| || |||||| || | || |||||||| || Sbjct 48306 ACTGG-CTCATACATTGCTGGCACTAACGGCACCTCGAACGGCATTGTACCCATGCTACG 48248 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| || | || ||||| || ||||| || |||||||| ||| | || || || Sbjct 48247 TGTCTTCAATAACACTGCAAGATACGTAGATCAGGGTGGCAACAAGAGACCTGGTGCTTT 48188 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 || || || ||||||||| || | ||| |||| ||||| ||||| || || || || Sbjct 48187 CGCCATCTACCTCGAGCCTTGGCACTCGGATGTTTTCGAGTTCCTTGATCTTCGAAAGAA 48128 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || |||||| | ||||| || ||||| ||| || || ||| || |||| | Sbjct 48127 CCATGGCAAGGAGGAAGTTCGTGCCCGCGATCTCTTCCTGGCTCTCTGGATTCCTGATCT 48068 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || ||||| || || ||| || || | ||| | ||| | || || |||| || | Sbjct 48067 CTTCATGAAACGTGTTGAGA-AGAATGGAGAGTGGACCCTCATGTGTCCTAACGAGTGCC 48009 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 | ||||| | || || | || || || | | || || ||||| ||||| ||| | | Sbjct 48008 CTGGTCTAGCTGACGTTTATGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAAGCAG 47949 Query 364085 AGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 |||| | || ||| ||| || |||||||| |||| ||||| | || | | Sbjct 47948 AGGGTCGCGGCCGCCAGAAGATTAAGGCTCAGAAGCTGTGGTACGCCATTCTCGAGGCTC 47889 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 ||| |||||| |||| |||| ||| | ||||| ||| |||||||||||| |||| Sbjct 47888 AGACTGAGACTGGAAATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGTAACC 47829 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACC 364263 || || | |||||||| |||| |||| | || || || |||||||| ||||| ||| || Sbjct 47828 AGAAGAATCTTGGTACTATTC-GCAGCTCGAATCTTTGCACCGAGATCATTGAGTACTCC 47770 Query 364264 GCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---- 364319 || || || ||| || || || ||| | || || ||||| | ||| | ||||| Sbjct 47769 GCCCCTGATGAGGTGGCTGTCTGCAACTTAGCTTCCCTCGCGTTGCCGTCCTTTGTTGAC 47710 Query 364320 --AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTT 364375 || || || |||| |||| |||| | | |||| || ||| | || | | | Sbjct 47709 TATAACGAAGGCACTTATGACTTCCAGAAGTTGCATGAGGTTACCCAAGTCGTCGT--TC 47652 Query 364376 GCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGT---T 364432 |||| | ||| |||| || |||||||| || | || || ||| ||| Sbjct 47651 ACAATTTGAACAGAATTATTGATGTCAATTATTACCCCGTCCCAGAGGCC---CGTAACA 47595 Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTG--ACGTTTTTAT 364490 || ||||| || || || |||||||||||||| ||||| || |||| || || || Sbjct 47594 GCAACATGCGACACCGTCCCATTGGTCTTGGTGTTCAGGGTCTTGCTGATACATTCTTGG 47535 Query 364491 GATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGA 364550 || | ||| | ||||| || || || ||| | |||| ||| ||||||| || Sbjct 47534 CAT--TGCGTATGCCTTTTGAGTCACCAGAGGCTAGACAATTAAACAAGCAGATCTTCGA 47477 Query 364551 AACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTA 364610 || || || |||||| ||||||| || || | || || | | || || Sbjct 47476 GACGATCTACCATGCCGCCTTGACTGCGTCCACGGAGATTGCCAAGGTCGAAGGCCCTTA 47417 Query 364611 CTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGT 364670 |||||| || ||||| || || | |||||||| | | || | || | |||||||| Sbjct 47416 CTCTACCTACGAGGGTTCTCCCGTCTCGCAGGGCATCCTTCAATACGACATGTGGAATGT 47357 Query 364671 CACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTA 364729 ||| ||||| | | ||| ||||| | || | | ||| | ||| | ||||| Sbjct 47356 CACCCCATCGGATCTTTGGGACTGGACCAGCCTCAAGGAGCAA-ATCAAGCAAAATGGTG 47298 Query 364730 CTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789 |||||| | | | || |||||||||||||| || | |||||| | || | Sbjct 47297 TGCGCAACAGCTTGTTGGTCGCCCCCATGCCCACGGCCAGCACATCCCAGATCTTGGGTA 47238 Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAG 364849 |||| ||||||||||| || | || ||| | || || ||||| || || | || | Sbjct 47237 ACAATGAGTGCTTCGAGCCTTACACTTCCAACATCTACTCTCGCCGTGTCCTCGCTGGCG 47178 Query 364850 AATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTG 364909 | || | ||| ||||| | | ||||||| ||| ||| || || ||| || Sbjct 47177 AGTTCCAGGTCGTTAACCCCTGGTTGCTCAAGGACCTTGTTGACATGGGTCTCTGGTCTG 47118 Query 364910 ACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTC 364969 | |||||||||||| |||||| |||| ||||| | |||||||| || ||| Sbjct 47117 ATAGCATGAAGAACCGTATCATTGCCGAGGGCGGTTCAATTCAGAACATCCCCAACATTC 47058 Query 364970 CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG 365029 | | ||| | ||| || ||||||| ||||| |||||||| ||| ||||| | | Sbjct 47057 CTGCTGATATCAAGGCTCTTTACAAGACCGTCTGGGAAATATCCCAACGAACCGTTGTCC 46998 Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTAT 365057 | ||||| || || || ||||| || || Sbjct 46997 AGATGGCCGCTGACCGTGGTGCGTTCAT 46970 >seq19 Length=350955 Score = 91.5 bits (100), Expect = 4e-13 Identities = 153/217 (71%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCA--TTCGCGGAAC 22492 || ||||| || ||||| ||| | ||||| |||| ||| || || ||||| ||| Sbjct 189649 AAGAAGGCCGACTGGGCCCTGCACTGGATTGCCGACAA-GAA-GTCCACCTTCGCCCAAC 189706 Query 22493 GTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCT 22552 |||||||||| || || | ||||| || || ||||| |||||| || | | |||| Sbjct 189707 GTCTTATTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGAGCCTTCGCTTCCATCT 189766 Query 22553 TTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCC 22612 | ||||| || || |||| | ||||| ||||| || || || || || | || | Sbjct 189767 TCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAACTCATCTCGC 189826 Query 22613 GAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 | ||||||||||| || ||||| || || || |||| Sbjct 189827 GTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGCT 189863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345166894910